Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq5121 167 4e-39 seq3699 167 4e-39 seq1740 167 4e-39 seq1554 159 6e-37 seq1697 102 1e-19 seq1365 102 1e-19 >seq5121 Length=1223 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 255 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 314 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 315 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 354 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 7 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 65 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 66 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 109 >seq3699 Length=1221 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 733 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 792 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 793 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 832 Score = 102 bits (112), Expect = 1e-19 Identities = 93/114 (82%), Gaps = 5/114 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 502 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 560 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC 127 || || ||| | ||| || || | | |||| | |||||||| || ||||| Sbjct 561 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAGTGTCCAAC 612 >seq1740 Length=1006 Score = 167 bits (184), Expect = 4e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 250 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGCCATGC 309 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 310 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 349 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 2 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 60 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 61 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 104 >seq1554 Length=1231 Score = 159 bits (176), Expect = 6e-37 Identities = 96/100 (96%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 841 GTCTCGTTCGTTATCGGAATTAACCAG-CAAATCACTCCACGAACTAAGAACGGCCATGC 899 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||||||||||||||||| Sbjct 900 ACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 939 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 593 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 651 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 652 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 695 >seq1697 Length=2473 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 2299 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 2357 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 2358 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 2401 >seq1365 Length=1273 Score = 102 bits (112), Expect = 1e-19 Identities = 88/106 (83%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||| ||| Sbjct 990 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 1048 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 1049 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 1092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796760316621