Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq4953 257 3e-66 >seq4953 Length=802672 Score = 257 bits (284), Expect = 3e-66 Identities = 193/227 (85%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 219425 GACAGTGTCTGGTTGGCAGTTTGACTGGGGCGGTCGCCTCCCAAATAGTAACGGAGGCGC 219366 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 |||||| | ||||||| ||| |||||| ||| | | |||| ||||||| ||||| | | Sbjct 219365 CCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCATAGAGTGTAAAGGCAGAAGGGAGCT 219306 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||||| || || ||| ||||||||||||||||||||||| |||||||| ||| | Sbjct 219305 TGACTGCGAGACATACAGGTCGAGCAGGGACGAAAGTCGGGCTTAGTGATCCGGTGGTAC 219246 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| |||| |||||| ||||||||||||||||||||||||| Sbjct 219245 CATATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCTGGGGATA 219199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982349494816