Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq4953 138 1e-30 >seq4953 Length=802672 Score = 138 bits (152), Expect = 1e-30 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| ||||| |||||||||| | || ||||||| | || |||||||| || Sbjct 219583 GGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCTTCTTCACAGGTATCTTAATTTCACCGA 219642 Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | ||| || ||||||||| ||| || ||||||| ||||||||||||||| Sbjct 219643 GTCTCTCG-TTGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCC 219701 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 219702 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 219761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547172747559