Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq4953 201 2e-49 seq16 201 2e-49 >seq4953 Length=802672 Score = 201 bits (222), Expect = 2e-49 Identities = 163/195 (84%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | ||||| ||||||| ||| |||||||||||| || ||||| |||||| ||| Sbjct 1178 TTTACGAGCCGAAACCCTTCTT-CACTCACGCGGCATTG-CTCCATCAGACTTTCGTCCA 1235 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| ||| | Sbjct 1236 TTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAAT 1295 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||| | |||||||| | | |||| ||| | ||||||||||||| ||| ||||| Sbjct 1296 GTGGCCGATTACCCTCTCAGGTCGGCTACGCATCATTGCCTTGGTGAGCCTTTATCTCAC 1355 Query 182 CAACTAGCTAATCCG 196 |||||||||||| || Sbjct 1356 CAACTAGCTAATGCG 1370 Score = 201 bits (222), Expect = 2e-49 Identities = 163/195 (84%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | ||||| ||||||| ||| |||||||||||| || ||||| |||||| ||| Sbjct 785594 TTTACGAGCCGAAACCCTTCTT-CACTCACGCGGCATTG-CTCCATCAGACTTTCGTCCA 785537 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| ||| | Sbjct 785536 TTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAAT 785477 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||| | |||||||| | | |||| ||| | ||||||||||||| ||| ||||| Sbjct 785476 GTGGCCGATTACCCTCTCAGGTCGGCTACGCATCATTGCCTTGGTGAGCCTTTATCTCAC 785417 Query 182 CAACTAGCTAATCCG 196 |||||||||||| || Sbjct 785416 CAACTAGCTAATGCG 785402 >seq16 Length=193047 Score = 201 bits (222), Expect = 2e-49 Identities = 163/195 (84%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | ||||| ||||||| ||| |||||||||||| || ||||| |||||| ||| Sbjct 1177 TTTACGAGCCGAAACCCTTCTT-CACTCACGCGGCATTG-CTCCATCAGACTTTCGTCCA 1234 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 |||| || |||||| ||||||||||||||||||||||||| |||||||||||| ||| | Sbjct 1235 TTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAAT 1294 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||| | |||||||| | | |||| ||| | ||||||||||||| ||| ||||| Sbjct 1295 GTGGCCGATTACCCTCTCAGGTCGGCTACGCATCATTGCCTTGGTGAGCCTTTATCTCAC 1354 Query 182 CAACTAGCTAATCCG 196 |||||||||||| || Sbjct 1355 CAACTAGCTAATGCG 1369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071944888480