Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq4953 255 1e-65 >seq4953 Length=802672 Score = 255 bits (282), Expect = 1e-65 Identities = 321/421 (76%), Gaps = 25/421 (6%) Strand=Plus/Plus Query 7 ATCCACAGGTCATTCC-GCTAACTTTTTCAACGGTAGTCGG-TTCGGTCCTCCAGTTAGT 64 ||||||| |||| || || |||||| ||||| || ||| ||||| ||||| || || Sbjct 220849 ATCCACACCTCATCCCAGC--ACTTTT-CAACG-TACACGGGTTCGGACCTCCGGTGCGT 220904 Query 65 AGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCC 124 | ||||| || ||||| |||| ||| ||||||||| || ||||| ||||||||| | Sbjct 220905 A-TTACCGCAC-TTTCATCCTGGACAT-GGATAGATCACCTGGTTT-CGGGTCTATGGCA 220960 Query 125 CAGCGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTC--GGTTA 181 | ||| | ||||||| | ||||||||||| |||| || |||| || || | ||| Sbjct 220961 -ACATACTTCAACGCCCTATTCAGACTCGCTTT-CGCTTCGGCTCCGCTTTTTCAGCTTA 221018 Query 182 AGCTT---TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCC 238 | ||| ||| ||| |||| |||| | |||| ||||| ||| |||| |||||| Sbjct 221019 ACCTTGCATGCAACT----ATAACTCGCCGGTTCATTCTACAAGAGGCACGCTATCACCC 221074 Query 239 AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTC 298 || ||||||| |||||||||| ||| | |||| ||||| ||||||||||||||| Sbjct 221075 TTAAA--TGGGCTCTAACTGCTTGTAGGCACATGGTTGCAGGAACTATTTCACTCCCCT- 221131 Query 299 TCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTA 358 |||||||| |||||| |||||||||||||||||| ||||||||||||||| | |||||| Sbjct 221132 TCCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACTAGGTAGTA 221191 Query 359 TTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||||||||| |||||||| ||| ||| ||| | ||||| |||| || | |||| Sbjct 221192 TTTAGCCTTGGGAGATGGTCCTCCCGGCTTCCGACGACGTTTCACGTGTGTCGCCGTACT 221251 Query 419 C 419 | Sbjct 221252 C 221252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241536169344