Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq4953 199 8e-49 seq16 197 3e-48 >seq4953 Length=802672 Score = 199 bits (220), Expect = 8e-49 Identities = 235/317 (74%), Gaps = 17/317 (5%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| |||| |||||||| || || ||| ||||||||||||||||| Sbjct 1209 GGCATTGCTCCATCAGACTTTCGTCCATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAG 1268 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||||||||||||||||||||||||||||| | | |||||||| ||||||| || Sbjct 1269 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGATTACCCTCTCAGGTCGGCTACGCAT 1328 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | ||||||| || ||||||||||||||| ||||| |||||| ||||| | Sbjct 1329 CATTGCCTTGGTGAGCCTTTATCTCACCAACTAGCTAATGCGCCGCGGATCCATCCAAAA 1388 Query 181 GCGATA----------AATCTTTGGTCAA---AGAATGATGCCATCCTCTGACATTATGC 227 |||||| ||||| |||| | || ||| | || | |||| | Sbjct 1389 GCGATAGCACAAAGGCCATCTT---TCAAACGAAAACCATGTGGTTTTC-GTTGTTATAC 1444 Query 228 GGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTA 287 ||||||||| | ||||||| ||||| || ||| |||||||| ||||||||| Sbjct 1445 GGTATTAGCATCTGTTTCCAGGTGTTATCCCCTTCTTCTGGGCAGGTTATCCACGTGTTA 1504 Query 288 CTCACCCGTCCGCCACT 304 |||||| || ||||||| Sbjct 1505 CTCACCAGTTCGCCACT 1521 Score = 199 bits (220), Expect = 8e-49 Identities = 235/317 (74%), Gaps = 17/317 (5%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| |||| |||||||| || || ||| ||||||||||||||||| Sbjct 785563 GGCATTGCTCCATCAGACTTTCGTCCATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAG 785504 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||||||||||||||||||||||||||||| | | |||||||| ||||||| || Sbjct 785503 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGATTACCCTCTCAGGTCGGCTACGCAT 785444 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | ||||||| || ||||||||||||||| ||||| |||||| ||||| | Sbjct 785443 CATTGCCTTGGTGAGCCTTTATCTCACCAACTAGCTAATGCGCCGCGGATCCATCCAAAA 785384 Query 181 GCGATA----------AATCTTTGGTCAA---AGAATGATGCCATCCTCTGACATTATGC 227 |||||| ||||| |||| | || ||| | || | |||| | Sbjct 785383 GCGATAGCACAAAGGCCATCTT---TCAAACGAAAACCATGTGGTTTTC-GTTGTTATAC 785328 Query 228 GGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTA 287 ||||||||| | ||||||| ||||| || ||| |||||||| ||||||||| Sbjct 785327 GGTATTAGCATCTGTTTCCAGGTGTTATCCCCTTCTTCTGGGCAGGTTATCCACGTGTTA 785268 Query 288 CTCACCCGTCCGCCACT 304 |||||| || ||||||| Sbjct 785267 CTCACCAGTTCGCCACT 785251 >seq16 Length=193047 Score = 197 bits (218), Expect = 3e-48 Identities = 236/319 (74%), Gaps = 21/319 (7%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| |||||| |||| |||||||| || || ||| ||||||||||||||||| Sbjct 1208 GGCATTGCTCCATCAGACTTTCGTCCATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAG 1267 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||||||||||||||||||||||||||||| | | |||||||| ||||||| || Sbjct 1268 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGATTACCCTCTCAGGTCGGCTACGCAT 1327 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | ||||||| || ||||||||||||||| ||||| |||||| ||||| | Sbjct 1328 CATTGCCTTGGTGAGCCTTTATCTCACCAACTAGCTAATGCGCCGCGGATCCATCCAAAA 1387 Query 181 GCGATA----------AATCTTTGGTCAA---AGAATGATGCCATCCTC--TGACATTAT 225 |||||| ||||| |||| | || ||| | || || |||| Sbjct 1388 GCGATAGCACAAAGGCCATCTT---TCAAATGAAAACCATGTGGTTTTCATTG---TTAT 1441 Query 226 GCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGT 285 |||||||||| | ||||||| ||||| || ||| |||||||| ||||||| Sbjct 1442 ACGGTATTAGCATCTGTTTCCAGGTGTTATCCCCTTCTTCTGGGCAGGTTATCCACGTGT 1501 Query 286 TACTCACCCGTCCGCCACT 304 |||||||| || ||||||| Sbjct 1502 TACTCACCAGTTCGCCACT 1520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998348672256