Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq4198 113 1e-22 >seq4198 Length=487851 Score = 113 bits (124), Expect = 1e-22 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 174 AAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGG 233 || || || |||||||| || ||| ||||||||||| | ||||||||| || ||||| Sbjct 246346 AAATCAGCAATCACGCCATCACGCATGGGACGAATGGCCGTAATATTGCCCGGAGTACGA 246405 Query 234 CCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTC 293 || | ||| ||||||| || || ||||||| || || | | | | | || Sbjct 246406 CCAACCATCTGCTTGGCTTCTTCCCCTACGGCAA-GAAGCTGCTTTTTTCCTCGTATATC 246464 Query 294 CG-AATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAG 352 | ||| |||||||| || || || ||||| |||||||| || | ||||||| ||| Sbjct 246465 TGCAATAGCCACAACAGAGGGTTCGTTCAGTACGATACCCCGTCCTTTTACGTAAACAAG 246524 Query 353 GGTGTTGGCAGTGCCCAGGTCAAT 376 |||||||||||| ||||||||||| Sbjct 246525 GGTGTTGGCAGTACCCAGGTCAAT 246548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353530411424