Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq4953 208 2e-51 >seq4953 Length=802672 Score = 208 bits (230), Expect = 2e-51 Identities = 292/404 (72%), Gaps = 8/404 (2%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 || |||||||| ||||||||| |||||| ||||||| |||| ||| ||| | | | || Sbjct 220252 CGTCTACGCCTCTCGGCCTCGACTTAGGTCCCGACTAACCCTGGGTGGACGAGCCTTCCC 220311 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||| | | |||| | | ||||| ||| | |||||||||| || | Sbjct 220312 CAGGAAACCTTAGTCATTCGGTGAATCAGATTCTCACTGATTTTTCGCTACTCATACCGG 220371 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCAC--CACTGACACG 178 |||||||||| | |||||| | | | || |||||| | || | | Sbjct 220372 CATTCTCACTTCTAAGCGCTCCACTAGTCCTT-ACGGTCTAGCTTCGTTGCCCTTAGA-- 220428 Query 179 ACGCTCCCCTACCCAACCACACAG--GTTGCCACAGCTTCGGCGGATAACTTAAGCCCCG 236 |||||| |||| | | ||| || | |||||| |||| ||| | ||||||| Sbjct 220429 ACGCTCTCCTATCACGCGACAAAGTCGCGTCCACAGTCTCGGTA-ATATGCTTAGCCCCG 220487 Query 237 CTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGG 296 || ||| ||||||| |||||||| ||| |||||||||||||||||||||| || | ||| Sbjct 220488 GTAAATTTTCGGCGCAGAATCACTCGACTAGTGAGCTATTACGCACTCTTTAAATGGTGG 220547 Query 297 CTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCA 356 ||||||| ||||||| |||| |||||||| |||||||||| ||||| ||||| || Sbjct 220548 CTGCTTCTGAGCCAACATCCTAGTTGTCTATGCAACTCCACCGCCTTTTCCACTTAGCAT 220607 Query 357 CCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | |||||| ||||| ||| || ||||||||||| |||| ||| Sbjct 220608 ATATTTAGGGACCTTAACTGGTGGTCTGGGCTGTTCCCCTTTCG 220651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177539459584