Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq4953 102 6e-20 >seq4953 Length=802672 Score = 102 bits (112), Expect = 6e-20 Identities = 107/138 (78%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCAT-TCATAGCCACCGGATCACTATGACCT 59 || |||||||||||||||||||||||||||||| | || |||||||||||||| | || Sbjct 219210 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATATGGTA-CCACCGGATCACTAAGCCCG 219268 Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTA 119 |||||| |||||| | ||| ||||||| |||||| | ||| |||| || |||| Sbjct 219269 ACTTTCGTCCCTGCTCGACCTGTATGTCTCGCAGTCAAGCTCCCTTCTGCCTTTACACTC 219328 Query 120 TCACTACGATTTCCGACC 137 | | ||||||| ||| Sbjct 219329 TATGAATGATTTCCAACC 219346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351983034700