Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq4953 102 8e-20 >seq4953 Length=802672 Score = 102 bits (112), Expect = 8e-20 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | ||||||||||||||| | || |||||| |||| Sbjct 219222 GTTGAGCGATGGCCCTTCCATATGGTACCACCGGATCACTAAGCCCGACTTTCGTCCCTG 219281 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| | || |||||||||||||| ||| |||| || |||| | ||| || Sbjct 219282 CTCGACCTGTATGTCTCGCAGTCAAGCTCCCTTCTGCCTTTACACTCTATGAATGATTTC 219341 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 219342 CAACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTA 219377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473576413092