Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq4583 84.2 4e-14 >seq4583 Length=779074 Score = 84.2 bits (92), Expect = 4e-14 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 ||| | || | |||||| ||| | ||||||||||| || || | || |||||| || Sbjct 707968 AGCGCAGCCAAGAAGGCG-CTTTGCGGAATTTCCACTTTACCAAACTGCCGCATGCGCTT 708026 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 |||||| |||| ||||| || || || |||||||||||| | ||||| || || || Sbjct 708027 TTTACCTTCCTTCTGCTTTTCCAGAAGTTTGCGCTTACGGGAGATATCACCACCATAACA 708086 Query 210 TTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCC 269 |||||| ||| | ||| || || | || |||||||| | || | ||| Sbjct 708087 CTTGGCCGTTACATCCTTGGAAAGTGCGCCAATGGTTTCACGCGCAATCACCTTACTGCC 708146 Query 270 AATGGCGGCCTGGATCGC 287 ||| |||||||| || || Sbjct 708147 AATAGCGGCCTGAATGGC 708164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838356897856