Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq4953 268 3e-69 >seq4953 Length=802672 Score = 268 bits (296), Expect = 3e-69 Identities = 339/454 (75%), Gaps = 14/454 (3%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 |||||||||||||| |||||||| ||||| |||||||||| ||||||||| |||| | || Sbjct 220955 TAGACCCGAAACCAGGTGATCTATCCATGTCCAGGATGAAAGTGCGGTAATACGCACCGG 220896 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 |||||||||||| | |||||||| | |||||||| ||||| ||| ||||||| | Sbjct 220895 AGGTCCGAACCCGTGTACGTTGAAAAGTGCTGGGATGAGGTGTGGATAGCGGTGAAATTC 220836 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC--AAGT 210 |||| |||||||| |||||||||||||||||||| |||||| ||||| | | Sbjct 220835 CAAACGAACTTGGAGATAGCTGGTTCTCTCCGAAATAGCTTTAGGGTTAGCCTCGGATTT 220776 Query 211 ATCACCATCGGGGGTAGAGC-ACTGTTATGGCTAGGGGGTC---ATTGCGACTTACCAAA 266 | | ||| || |||||||| |||||| ||| | |||||| ||| || |||| || Sbjct 220775 AGAATCAT-GGAGGTAGAGCAACTGTT-TGGACAAGGGGTCCGTCTTG-GA-TTACTAAG 220720 Query 267 CCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAG 326 ||||||||||| | | | || || | ||||||| || ||| ||| |||| Sbjct 220719 TTCAGATAAACTCCGAATACCATTGATTTATATC-CGGGAGTCAGACGATGAGTGATAAG 220661 Query 327 GTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAA 386 ||| | ||| ||| ||| | || ||| | ||| ||||| ||| |||| ||||| Sbjct 220660 ATCCATCGTCGAAAGGGGAACAGCCCAGACCACCAGTTAAGGTCCCTAAATATATGCTAA 220601 Query 387 GTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATT 446 || || || | || |||| ||||| |||||||||||||| |||||||||| Sbjct 220600 GTGGAA--AAGGCGGTGGAGTTGCATAGACAACTAGGATGTTGGCTCAGAAGCAGCCA-C 220544 Query 447 CATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||||||||||||| ||||||||||||||| Sbjct 220543 CATTTAAAGAGTGCGTAATAGCTCACTAGTCGAG 220510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689513137664