Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq4953 122 2e-25 >seq4953 Length=802672 Score = 122 bits (134), Expect = 2e-25 Identities = 185/259 (71%), Gaps = 11/259 (4%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAG-TAGCTTGCGAT 59 || || ||||||| ||||||||| | || |||||||||||| | || | |||| Sbjct 221652 AGGGCGCATGGTGAATGCCTTGGTACTAGGAGCCGATGAAGGACGGAACTAACAC-CGAT 221594 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||||||| | | | |||||||||| |||||||||||||||||||||| Sbjct 221593 ATGCTTCGGGGAGCT-GTACGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCAA 221535 Query 120 CCCTTTGGGTCATTGCATGC-------TGAATACATAGGTAT-GCAAAGCGAACGCGGCG 171 | | | ||| || ||| ||||| ||||| | | | | ||||||| | Sbjct 221534 TCATCTTAGTCGATGGTTGCACGACAGTGAATTCATAGCTGTCGTGCGGTAAACGCGGGG 221475 Query 172 AACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGC 231 |||||||||||||||||| | |||||| ||||| || ||||||| |||||| ||| Sbjct 221474 AACTGAAACATCTAAGTACCCGCAGGAGTAGAAAAAAATTTCGATTCCCTAAGTAGCGGC 221415 Query 232 GAGCGAAATGGGATGAGCC 250 ||||||| |||| |||| Sbjct 221414 GAGCGAACGGGGAACAGCC 221396 Score = 122 bits (134), Expect = 2e-25 Identities = 185/259 (71%), Gaps = 11/259 (4%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAG-TAGCTTGCGAT 59 || || ||||||| ||||||||| | || |||||||||||| | || | |||| Sbjct 786935 AGGGCGCATGGTGAATGCCTTGGTACTAGGAGCCGATGAAGGACGGAACTAACAC-CGAT 786993 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||||||| | | | |||||||||| |||||||||||||||||||||| Sbjct 786994 ATGCTTCGGGGAGCT-GTACGTAAGCTTTGATCCGGAGATTTCCGAATGGGGAAACCCAA 787052 Query 120 CCCTTTGGGTCATTGCATGC-------TGAATACATAGGTAT-GCAAAGCGAACGCGGCG 171 | | | ||| || ||| ||||| ||||| | | | | ||||||| | Sbjct 787053 TCATCTTAGTCGATGGTTGCACGACAGTGAATTCATAGCTGTCGTGCGGTAAACGCGGGG 787112 Query 172 AACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGC 231 |||||||||||||||||| | |||||| ||||| || ||||||| |||||| ||| Sbjct 787113 AACTGAAACATCTAAGTACCCGCAGGAGTAGAAAAAAATTTCGATTCCCTAAGTAGCGGC 787172 Query 232 GAGCGAAATGGGATGAGCC 250 ||||||| |||| |||| Sbjct 787173 GAGCGAACGGGGAACAGCC 787191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918352785056