Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1708 455 1e-125 seq3769 453 4e-125 seq1669 453 4e-125 seq1508 295 2e-77 seq5141 167 8e-39 seq3259 122 3e-25 seq3074 96.9 1e-17 seq1160 93.3 1e-16 seq1691 89.7 2e-15 >seq1708 Length=1032 Score = 455 bits (504), Expect = 1e-125 Identities = 327/378 (87%), Gaps = 14/378 (4%) Strand=Plus/Plus Query 170 CAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC- 228 ||||||| || || | ||||||| |||| ||||| |||||||||||||| | || Sbjct 265 CAGTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGAT 324 Query 229 -CGAAACGG------------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAG 275 | |||| | |||||||||||||||||||||| | ||| | ||| | Sbjct 325 ACCAAACCGAAGTCTAATATACTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTG 384 Query 276 TCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTC 335 | || ||||||||||||||| ||||||||||||||||||| ||| |||||||||||| Sbjct 385 CCAGATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTC 444 Query 336 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTC 395 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 445 CCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTC 504 Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 505 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 564 Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515 |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 565 CCGCCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 624 Query 516 AATCACATTGCGTCAACA 533 |||||||||| ||||||| Sbjct 625 AATCACATTGTGTCAACA 642 >seq3769 Length=1000 Score = 453 bits (502), Expect = 4e-125 Identities = 325/375 (87%), Gaps = 13/375 (3%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 528 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 469 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 468 CAAACCGAAGTCTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 409 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 408 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 349 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 348 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATG 289 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 229 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 228 CCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 169 Query 519 CACATTGCGTCAACA 533 ||||||| ||||||| Sbjct 168 CACATTGTGTCAACA 154 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 834 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 775 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 774 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 728 >seq1669 Length=1035 Score = 453 bits (502), Expect = 4e-125 Identities = 325/375 (87%), Gaps = 13/375 (3%) Strand=Plus/Minus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 456 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 397 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 396 CAAACCGAAGTCTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 337 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 336 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 277 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 276 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATG 217 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 216 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 157 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 156 CCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 97 Query 519 CACATTGCGTCAACA 533 ||||||| ||||||| Sbjct 96 CACATTGTGTCAACA 82 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 763 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 704 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 703 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 657 >seq1508 Length=1356 Score = 295 bits (326), Expect = 2e-77 Identities = 171/176 (97%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 502 TAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 443 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 442 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACT 383 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 382 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 327 >seq5141 Length=1087 Score = 167 bits (184), Expect = 8e-39 Identities = 98/102 (96%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 709 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGCGCTTACTTGAATTTCTTCACT 650 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||| ||||||| Sbjct 649 TTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 608 >seq3259 Length=1158 Score = 122 bits (134), Expect = 3e-25 Identities = 133/178 (75%), Gaps = 13/178 (7%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 981 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 1040 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 1041 CAAACCGAAGTCTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 1100 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCC 336 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||| Sbjct 1101 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCC 1158 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 676 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 735 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 736 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 782 >seq3074 Length=6289 Score = 96.9 bits (106), Expect = 1e-17 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 5634 TAGTAGATAGGGACAGTAGGAATCTCGTTAATCAATTCATGCGCGTCACTAATTAGAT 5691 >seq1160 Length=1177 Score = 93.3 bits (102), Expect = 1e-16 Identities = 51/51 (100%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 454 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 504 >seq1691 Length=1186 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 911 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTTCGTTATT 970 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 971 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 1017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635115934368