Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq4953 372 1e-100 >seq4953 Length=802672 Score = 372 bits (412), Expect = 1e-100 Identities = 427/566 (75%), Gaps = 16/566 (3%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| |||| ||||||||||||||||||||| ||| |||||||| ||||| || Sbjct 219283 TCGACCTGTATGTCTCGCAGTCAAGCTCCCTTCTGCCTTTACACTCTATGAATGATTTCC 219342 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| ||||||||||||||||||||||||||||| ||||||||| | |||||||||| Sbjct 219343 AACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTACTATTTGGGAGG-CGACCGCCCCAG 219401 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGA-TATCCA 179 | ||||| || ||||| ||||||| || | | | | | | || ||||||| | | || Sbjct 219402 TCAAACTGCCAACCAGACACTGTCTCCGAGCACGTTGAGTGCTCAGGGTTAGAGTGTTCA 219461 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | | | || || |||| ||| ||| |||| | |||||| | | ||| | Sbjct 219462 C-ATAGCAAGGGTAGTATCCCAATGACGCCTCCGCCGAAGCTAGCGCTCCGGTTTCAATG 219520 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||| ||||||||| |||| | | | | |||||| ||||||| ||| ||| ||| Sbjct 219521 GCTCCTACCTATCCTGTACAAGCTGTGCAAACACCCAATATCAAGCTACAGTAAAGCTCC 219580 Query 300 C-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||| ||||||| |||| | ||| || |||| || ||| ||||||||| Sbjct 219581 ATGGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCTTCTTCACAGGTATCTTAATTTCACC 219640 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || | |||||||||| | || |||||||||| ||||||| ||||||||||||| Sbjct 219641 GAGTCTCTCGTTGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTAC 219699 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 219700 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCT 219759 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||| || || || | || ||| || ||| |||||||||||||||| Sbjct 219760 TCATTTCGGAGCTTCGC------CG----AAGCTAACTCTTCCACTTAACCTTCCAGCAC 219809 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 |||||||||||||| || ||||| || Sbjct 219810 CGGGCAGGCGTCAGCCCCTATACGTC 219835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702312479616