Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4953 131 4e-28 seq16 131 4e-28 >seq4953 Length=802672 Score = 131 bits (144), Expect = 4e-28 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGC 128 || ||| || | || ||| ||||| | ||| | | ||||| || |||||| | | || Sbjct 1158 TTCTTCTCTAACAACAGAGTTTTACGAGCCGAA-ACCCTTCTTCACTCACGCGGCATTGC 1216 Query 129 TGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188 | ||||||| |||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct 1217 TCCATCAGACTTTCGTCCATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGG 1276 Query 189 ACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCT 248 |||||||||||| ||||||||| || |||||||| | ||| |||| | | || Sbjct 1277 GCCGTGTCTCAGTCCCAATGTGGCCGATTACCCTCTCAGGTCGGCTACGCATCATTGCCT 1336 Query 249 AGGTGGGCCGTTACCCCGCCTACTACCTAATG 280 |||| ||| ||| | | || |||| |||||| Sbjct 1337 TGGTGAGCCTTTATCTCACCAACTAGCTAATG 1368 Score = 131 bits (144), Expect = 4e-28 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGC 128 || ||| || | || ||| ||||| | ||| | | ||||| || |||||| | | || Sbjct 785614 TTCTTCTCTAACAACAGAGTTTTACGAGCCGAA-ACCCTTCTTCACTCACGCGGCATTGC 785556 Query 129 TGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188 | ||||||| |||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct 785555 TCCATCAGACTTTCGTCCATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGG 785496 Query 189 ACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCT 248 |||||||||||| ||||||||| || |||||||| | ||| |||| | | || Sbjct 785495 GCCGTGTCTCAGTCCCAATGTGGCCGATTACCCTCTCAGGTCGGCTACGCATCATTGCCT 785436 Query 249 AGGTGGGCCGTTACCCCGCCTACTACCTAATG 280 |||| ||| ||| | | || |||| |||||| Sbjct 785435 TGGTGAGCCTTTATCTCACCAACTAGCTAATG 785404 >seq16 Length=193047 Score = 131 bits (144), Expect = 4e-28 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 69 TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGC 128 || ||| || | || ||| ||||| | ||| | | ||||| || |||||| | | || Sbjct 1157 TTCTTCTCTAACAACAGAGTTTTACGAGCCGAA-ACCCTTCTTCACTCACGCGGCATTGC 1215 Query 129 TGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGG 188 | ||||||| |||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct 1216 TCCATCAGACTTTCGTCCATTGTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGG 1275 Query 189 ACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCT 248 |||||||||||| ||||||||| || |||||||| | ||| |||| | | || Sbjct 1276 GCCGTGTCTCAGTCCCAATGTGGCCGATTACCCTCTCAGGTCGGCTACGCATCATTGCCT 1335 Query 249 AGGTGGGCCGTTACCCCGCCTACTACCTAATG 280 |||| ||| ||| | | || |||| |||||| Sbjct 1336 TGGTGAGCCTTTATCTCACCAACTAGCTAATG 1367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068745052992