Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04]
5,141 sequences; 164,292,578 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq4765 596 1e-165
seq4678 448 4e-121
>seq4765
Length=3541379
Score = 596 bits (660), Expect = 1e-165
Identities = 1257/1857 (68%), Gaps = 41/1857 (2%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| |||||||| || ||||| ||||||| ||| || | || || ||||| |||||
Sbjct 3010797 TCGACGGTGAACTGTATGGCATTGGCAGCCGGCTTCGTGCGGAGGTAATACATCCCGGTT 3010738
Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCG 65197
|| |||||||| ||| | || || || || |||| | || |||| || |||||
Sbjct 3010737 TTAAGGCCAGCCTTCCACGAGTAAAAGTGTATGGATGTCAGCTTGCCATAGTTGGGCTCA 3010678
Query 65198 GCCACATGCATATTCAACGACTGACTCTGATCGATGTAACG-ACCACGATCTGCAGCCAT 65256
|||||||| || || ||||| |||||||||||||| |||| ||| |||||||| |||||
Sbjct 3010677 GCCACATGAATGTTGAACGATTGACTCTGATCGATA-AACGCACCGCGATCTGCGGCCAT 3010619
Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315
| |||| | || || | || |||||||| || ||||||||||| || || |
Sbjct 3010618 TTTAATGGTG-GATTTCACAGAGATCTCCCAAACCGTCTTGTACAGATCGCGAACATTCT 3010560
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375
||||| |||| || | ||||| || ||||| | | ||| || | || |||
Sbjct 3010559 GGGGAATGGCCTCGATATTCTGGATAGAGCCACGGCTGGAAATGATCTGGTTCTTCATGT 3010500
Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGA 65435
|| |||||| ||| || | |||| | | | |||| | |||| || ||||
Sbjct 3010499 CATCATCCCACAAGTCCAGCTCAGTTAGATCCCGCAATAGGTGATGGTTGACCACCTGGA 3010440
Query 65436 ACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAG 65495
| |||||||| || || || || |||||| || | ||| || || ||||||||
Sbjct 3010439 ATTCGCCGGAGAGAACGCGGCGTGTATAGATATTCGTGGTGTACGGCTCGAAGGATTCGT 3010380
Query 65496 TGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555
||||||| | || |||||||| ||||| || |||||||| || || | || |||||||
Sbjct 3010379 TGTTGCCCATTATCTGGGCAGTGGATGCCGTGGGCATGGGGGCCACGAGCAGAGAGTTTC 3010320
Query 65556 GCAATCCGT---TCATT-TCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611
| |||| || | || || | | || || | |||||| ||| | ||||
Sbjct 3010319 TAACGCCGTGTTTCTTGATCGATTCCTTCA-GC--TTTG-CCCAGTCCCAGA--GGTT-- 3010268
Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671
||| | | || | |||||| || | || ||| |||| | || | || ||
Sbjct 3010267 -CGTGGGTA-CCTTGTCCCACATGTCGTACTGGAGGATTCCCTTGCTCACGGGGCTGCCC 3010210
Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731
| | | || ||| || || ||| ||| |||| ||| |||| || || || ||
Sbjct 3010209 TCGTAGGTTTCATACGGGCCTTCGACCTGGGCCAGTTCACAACTGGCTTCCAGGGCTCCA 3010150
Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGC 65791
|||| || || || || || || |||| || || ||||| ||||| ||||| ||
Sbjct 3010149 TAATATATCGTTTCAAAGATCTGTTGATTCAGGAGACCCGCCTCCTCGCTTTCGTAGGGG 3010090
Query 65792 ATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGA 65851
| | |||||| | || | ||||| || || ||||| ||||| || ||||| |||||
Sbjct 3010089 AATCTCATCAGAATCAAGGCATCGGCGAGTCCCTGAACGCCAATGCCAATGGGGCGATGC 3010030
Query 65852 CGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTC 65911
| || ||| || || ||||| || | || || || ||||| || ||||| |||
Sbjct 3010029 CTCATATTCGATTTCCTGGCCTCCGGCAGGGGATAATAGTTGATGTCAATAATCTTGTTC 3009970
Query 65912 AAATTGCGTGTCACCACATGCACGAT-ACGTCG--CAATTGTTCGAAATCAAAA-TGTTT 65967
| ||| | || | |||| | | | || || || | | ||||| | | |||
Sbjct 3009969 AGATT-CTTGGC--CACAGTCTTGGTGACCTCCTTCAGCTTCTTAAAATCGTACGTCTTT 3009913
Query 65968 AGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCA 66027
||||| || ||||||| || || || | || || ||||||||
Sbjct 3009912 -------TCGGGCGT---------CACAAACATGTTGAGAGCGATGGACGCCAGGTTGCA 3009869
Query 66028 GACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCG 66087
||| || |||||||| || | || |||||||| ||||| ||||||||||| |||||
Sbjct 3009868 GACGGCGATCTCGTCGGGCGAGGAGTACTCGACGATTTCTGTGCACAGATTGCTGCACTT 3009809
Query 66088 TATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTA 66147
|||||||||| |||||| ||||| ||||| | ||||| ||||||||| | | ||||||
Sbjct 3009808 GATGGTGCCCACATTCTGCTGATTGCTCTTCCTGTTGCACGCATCCTTGAAGAGCATGTA 3009749
Query 66148 CGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCAC 66207
|||| |||| ||||| || || | ||| ||||||||| ||| || | | ||||| ||
Sbjct 3009748 CGGATTGCCAGTCTCCACCTGCGCCTCGATGATGGCGAACCACAGGGACTGAGCCTTAAC 3009689
Query 66208 CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267
|| || ||| | || | | ||||| | ||| || | || || || ||
Sbjct 3009688 TGTCCGATTGGCCTTTCCCTCGGCCTCGTATTTAAGGTACAGCTTCTCAAACTCGTCGCC 3009629
Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327
||| || || ||| | ||||||||||| || ||||| || ||||| | ||| |
Sbjct 3009628 CCACACATCCTGCAGGCCGGGACACTTGTGCGGGCACATTAGGGACCAGTTTTCATTCGC 3009569
Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387
|| || || |||||| ||||| |||||||||||||| ||||| |||||||| || ||
Sbjct 3009568 CTCGACGCGCTTCATAAAGAGATCGGGTATCCAGAGGGCATAGAATAGATCGCGAGCACG 3009509
Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447
| |||||| ||||| || || || || | |||||| |||| || | |||||
Sbjct 3009508 ATTCTCCTCCTTGCCGGTGTTCTTTTTCAGTTCCAAGAACTCGAAGACATCCGAGTGCCA 3009449
Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507
|| |||| |||||||| || | || || ||||||||||| ||||| ||||| ||
Sbjct 3009448 GGGCTCCAAATAGATGGCAAAGGCACCGGGCCGCTTGCCGCCACCCTGGTCCACGTACCG 3009389
Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567
||| |||||||||||||| |||| ||| || ||||| || || || ||||||| |||||
Sbjct 3009388 AGCCACATTGTTGAAGACTCGCAGCATGGGAACGAGGCCATTGGAGGTGCCATTTGTGCC 3009329
Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627
|||| | || || || || || |||||||| ||||| || || ||||
Sbjct 3009328 ACATATGGAAGTGCCCTTGGCACGGATGCAATGGACATTCAGGCCAATGCCGCCCGCCGA 3009269
Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687
||| ||||| ||||| | |||| | | || ||||| || || || || |
Sbjct 3009268 CTTGGAGATCATGGCACAGTGTTCCACCGACTTAAAAATGCCTTCGATCGAATCCGATGT 3009209
Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747
|||||||||||| |||| || || || || | ||||| || | ||| |||||
Sbjct 3009208 CATGGTCAGGAGGAAGCAGGACGAGAGCTGCGGCCGGTTCGTGGCAGCGGCGAACAGGGT 3009149
Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807
||| | ||||| || ||| | | |||| ||||||| ||||| | | |||||
Sbjct 3009148 GGGCGAGGCGTGTGTGAAGAAGCGCTCTGACAACAAATTGTATGTCTCCACAGCGGCATC 3009089
Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867
|||| ||| ||||| || || | || |||||||| | || || ||||| ||| |
Sbjct 3009088 GATGTCTTCACCATGGATTCCAATCGCCACGCGCATCAGCATGTGCTGCGGCCGCTCGGC 3009029
Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
| | | | || | | || || || || || ||||||||||||| |||||||||
Sbjct 3009028 AATCTTACCGTTTCTCTTCAGCAAATACGAACGCTCCAGGGTCTTGAAACCAAAGTA 3008972
>seq4678
Length=1229792
Score = 448 bits (496), Expect = 4e-121
Identities = 611/845 (72%), Gaps = 11/845 (1%)
Strand=Plus/Minus
Query 61106 AGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACT 61165
|||| || || ||||||||||| ||||| ||||| || |||||||| || | | ||||
Sbjct 1146942 AGGCCGAGGCCTCCTTCTGGACCGTGGAAGAGGTGGACTTGTCCAAGGATCTCACCGACT 1146883
Query 61166 GGGAGCGT-TTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224
|| | || ||| || | |||| || ||||| |||||| |||| |||||||||
Sbjct 1146882 GGCATCGCCTTAAGGAT-GACGAACGCCACTTCATCTCCCATGTGCTGGCCTTCTTTGCC 1146824
Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGT 61283
|| || || ||||| ||||| |||||| | |||| || ||| || |||||||| || |
Sbjct 1146823 GCCTCCGATGGTATTGTCAACGAGAATCTGGTGGAGCGCTTTAGC-CAGGAGGTACAGAT 1146765
Query 61284 GTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGAT 61343
| ||||| || || || || ||||||||||| ||||||||||| || || ||||||||
Sbjct 1146764 CACCGAGGCCCGCTGCTTTTATGGCTTCCAGATCGCCATGGAGAACGTGCATTCGGAGAT 1146705
Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403
||||||||| || ||||| || ||||| |||| | | || ||| |||||||
Sbjct 1146704 GTACAGTGTGCTGATCGACACTTACATTCGGGACCCACACCAGCGGGAATATCTGTTCAA 1146645
Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463
|||||| ||||| || |||||||||||||| || || || |||||| | |||||| |
Sbjct 1146644 TGCCATTGAGACCATGCCGGCGGTGAAGCGCAAGGCTGACTGGGCCCTGTCCTGGATCTC 1146585
Query 61464 CAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTA 61521
| ||| |||| | ||||| || || | | || ||||| | |||||||| |
Sbjct 1146584 T--TCCAAGTCGGCCAACTTTGGGGAGCGCATCATTGCGTTTGCCGCCGTCGAGGGCATT 1146527
Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581
|| ||||| || |||||| | || || ||| ||||||| || || || ||||| |||
Sbjct 1146526 TTCTTCAGCGGCAGCTTTGCCTCCATTTTCTGGCTGAAGAAGCGCGGCCTGATGCCTGGT 1146467
Query 61582 CTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTT 61641
|||||||| ||||||| |||| || ||||| ||||| |||| ||||| ||||| ||
Sbjct 1146466 TTGACCTTCTCCAATGAGCTGATCTCCCGCGATGAGGGTCTGCACTGTGACTTTGCGGTG 1146407
Query 61642 TTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTT 61701
|| | ||| | | |||||||| | || ||| | ||||| | ||||| |
Sbjct 1146406 CTGATGTTCCAGC---ATCTGGTGCAGCGACCGAGGCGCGAGCGCATCATCGAGATCATC 1146350
Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761
|| || || || || || ||||| || || || || || |||| || || |||
Sbjct 1146349 CGCGACGCTGTGGACATTGAGCAGGAGTTCCTCACCGATGCCCTGCCGGTTAATCTGATC 1146290
Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821
|||||||| |||| || ||||||||||| ||||| ||||| ||||| |||||| |||||
Sbjct 1146289 GGCATGAACTGTGACCTGATGTCGCAGTACATTGAGTTTGTGGCCGATCGTCTGCTGGTC 1146230
Query 61822 GATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881
|| |||| || |||||| || || || || || || | |||||||| |||||
Sbjct 1146229 GAGCTGGGCGTGGGAAAGATCTACAACACCAAGAATCCGTTCAACTTCATGGAGATGATC 1146170
Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAACGTTTGGGT 61941
||||||||||||||||| || || || ||||| || ||||| ||||| || ||||
Sbjct 1146169 TCGCTGGATGGCAAGACCAACTTCTTTGAGAAGAAGGTGGGCGAGTATCAGCGCATGGGC 1146110
Query 61942 GTAGC 61946
|| ||
Sbjct 1146109 GTGGC 1146105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397543090004240
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