Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20kikkawai_20[refseq_20GCF_5F000224215.1_202013-03-04] 5,141 sequences; 164,292,578 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq4953 89.7 7e-13 >seq4953 Length=802672 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 19331 GGGGAATTAGCTCAAC-GGTAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAAT 19389 |||||||||||||| | || ||||||||||||||||||||||| ||| | |||||||| Sbjct 221906 GGGGAATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGAGGTCAACGGTTCGATC 221847 Query 19390 CCGATATTCTCCAT 19403 ||| |||||||||| Sbjct 221846 CCGTTATTCTCCAT 221833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634039252434000