Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20melanogaster_20[refseq_20GCF_5F000001215.4_202014-08- 01] 1,870 sequences; 143,726,002 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1869 154 2e-35 seq1198 154 2e-35 seq441 150 3e-34 seq1 150 3e-34 seq869 145 1e-32 seq161 138 2e-30 seq941 111 2e-22 seq750 102 1e-19 seq305 73.4 6e-11 >seq1869 Length=76973 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 45307 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 45250 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 45249 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 45193 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 45192 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 45136 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 45135 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 45088 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 57788 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 57731 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 57730 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 57674 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 57673 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 57617 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 57616 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 57569 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 69491 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 69434 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 69433 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 69377 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 69376 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 69320 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 69319 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 69272 >seq1198 Length=1315 Score = 154 bits (170), Expect = 2e-35 Identities = 179/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 1136 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 1079 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 1078 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 1022 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 1021 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 965 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 964 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 917 >seq441 Length=4879 Score = 150 bits (166), Expect = 3e-34 Identities = 178/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 764 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 707 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 706 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 650 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | || ||| || ||||| ||| | || |||||||||||| Sbjct 649 TTACCCGGACCTCTCGGTCTAGTAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 593 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 592 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 545 >seq1 Length=23542271 Score = 150 bits (166), Expect = 3e-34 Identities = 178/229 (78%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 23212995 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 23212938 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 23212937 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 23212881 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | || ||| |||||||| ||| | | |||||||||||| Sbjct 23212880 TTACCCGGACCTCTCGGTCTAGTAAATA--CTCGTTGA-TACTTTCTTTGTAGCGCGCGT 23212824 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 23212823 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 23212776 Score = 145 bits (160), Expect = 1e-32 Identities = 177/229 (77%), Gaps = 13/229 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||||| Sbjct 23433807 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATTTC 23433749 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 23433748 AA-GTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 23433693 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | || ||| || ||||| ||| | || |||||||||||| Sbjct 23433692 TTACCCGGACCTCTCGGTCTAGTAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 23433636 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || || ||| |||||||||||||||||||||||||||||| ||||| || Sbjct 23433635 GCAGCTCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 23433588 Score = 129 bits (142), Expect = 9e-28 Identities = 165/221 (75%), Gaps = 25/221 (11%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 23281169 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 23281226 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | || | ||||| | || || || | |||| | | Sbjct 23281227 CAAGTTCATGTTCA--------------CAATCCCAAGCATGA--AAGTGGTTCAGCGGT 23281270 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | || ||| || ||||| ||| | || |||||||||||| Sbjct 23281271 TTACCCGGACCTCTCGGACTAGTAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 23281327 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 || |||||| ||||||||||||||||||||||||||||||| Sbjct 23281328 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGC 23281368 Score = 73.4 bits (80), Expect = 6e-11 Identities = 82/105 (78%), Gaps = 10/105 (10%) Strand=Plus/Plus Query 118 TTACCCGGACCTGTCGGCCAAG----GTGATAGACTCGTTGAATACAT-CAGTGTAGCGC 172 |||||||||||| |||| | || ||| || |||||| ||| | || |||||| Sbjct 23455245 TTACCCGGACCTCTCGGTCTAGAAACGTGT---ACACGTTGA-TACTTTCATTGTAGCCT 23455300 Query 173 GCGTGCGG-CCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 || |||| ||||| ||||||||| |||||||||||||||||||| Sbjct 23455301 GCACGCGGGCCCAGGACATCTAAGTGCATCACAGACCTGTTATTG 23455345 >seq869 Length=2916 Score = 145 bits (160), Expect = 1e-32 Identities = 177/229 (77%), Gaps = 13/229 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| | Sbjct 2673 GTACAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 2730 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 2731 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 2787 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | || ||| || ||||| ||| | || |||| ||||||| Sbjct 2788 TTACCCGGACCTCTCGGTCTAGTAAATACAC--GTTGA-TACTTTCATTGTAACGCGCGT 2844 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 2845 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2892 >seq161 Length=1074 Score = 138 bits (152), Expect = 2e-30 Identities = 169/219 (77%), Gaps = 15/219 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||| ||| ||||| || ||||||| | |||||| |||||| | Sbjct 281 GTACAAAGGGCAGGGACGT---CAATGCGAG-TTAATGACTCACACTTACTGGGAATT-C 335 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGAT 118 | ||| | | |||| || || | | ||||| | || || || | |||| | | Sbjct 336 CAAGTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGT 392 Query 119 T-ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 | |||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 393 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 449 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 215 || |||||| ||||||||||||||||||||||||||||| Sbjct 450 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATT 488 >seq941 Length=1134 Score = 111 bits (122), Expect = 2e-22 Identities = 93/109 (85%), Gaps = 5/109 (5%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 |||||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||| Sbjct 1132 TTACCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGT 1076 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 1075 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 1028 >seq750 Length=2511 Score = 102 bits (112), Expect = 1e-19 Identities = 91/109 (83%), Gaps = 5/109 (5%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGT 176 |||||||||||| |||| | || ||| || ||||| ||| | || |||| ||||||| Sbjct 2478 TTACCCGGACCTCTCGGTCTAGTAAATACAC--GTTGA-TACTTTCATTGTAACGCGCGT 2422 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||||||||||||||||||||||| ||||| || Sbjct 2421 GCAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 2374 >seq305 Length=13234 Score = 73.4 bits (80), Expect = 6e-11 Identities = 82/105 (78%), Gaps = 10/105 (10%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAG----GTGATAGACTCGTTGAATACAT-CAGTGTAGCGC 172 |||||||||||| |||| | || ||| || |||||| ||| | || |||||| Sbjct 1117 TTACCCGGACCTCTCGGTCTAGAAACGTGT---ACACGTTGA-TACTTTCATTGTAGCCT 1062 Query 173 GCGTGCGG-CCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 216 || |||| ||||| ||||||||| |||||||||||||||||||| Sbjct 1061 GCACGCGGGCCCAGGACATCTAAGTGCATCACAGACCTGTTATTG 1017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751986377050