Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq6828 145 1e-32 >seq6828 Length=421677 Score = 145 bits (160), Expect = 1e-32 Identities = 175/226 (77%), Gaps = 13/226 (6%) Strand=Plus/Plus Query 4 CAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTC 63 ||||||||||||||||| |||| ||||| || ||||||| | |||||| |||||| || Sbjct 168807 CAAAGGGCAGGGACGTAATCAATGCGAG-TTAATGACTCACACTTACTGGGAATT-CCAA 168864 Query 64 GTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT--TTCAAAGATT-A 120 ||| | | |||| || || | | ||||| | || || || | |||| | || | Sbjct 168865 GTTCATGTG-AACAGTTTCAGTTCACAATCCCAAGCATGA--AAGTGGTTCAGCGGTTTA 168921 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACAT-CAGTGTAGCGCGCGTGCG 179 ||||||||| |||| | ||| ||| || ||||| ||| | || |||||||||||||| Sbjct 168922 CCCGGACCTCTCGGTCTAGGAAATACAC--GTTGA-TACTTTCATTGTAGCGCGCGTGCA 168978 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||| |||||||| ||||||||||||||||||||| ||||| || Sbjct 168979 GCCCAGGACATCTAAAGGCATCACAGACCTGTTATTG-CTCAATCT 169023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751950163315