Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6828 161 2e-37 >seq6828 Length=421677 Score = 161 bits (178), Expect = 2e-37 Identities = 97/101 (96%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAAC-GGCCATG 217 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| Sbjct 169208 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACGAACTAAGAACGGGCCATG 169267 Query 218 CACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||| || ||||||||||||||||||||| Sbjct 169268 CACCACCACCCATAGATTCGAGAAAGAGCTATCAATCTGTC 169308 Score = 96.9 bits (106), Expect = 6e-18 Identities = 87/106 (82%), Gaps = 5/106 (5%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||| ||| Sbjct 168960 TCATTGTAGCGCGCGTGCAGCCCAGGACATCTAAAGGCATCACAGACCTGTTATTG-CTC 169018 Query 76 AAACTTCCAT--TGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG 119 || || ||| | ||| || || | | |||| | |||||||| || Sbjct 169019 AATCT--CATTATTGCTAGACGCAATTTGTCCATTTAAGAAGCTAG 169062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796747194321