Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq6192 385 1e-104 seq6828 383 5e-104 >seq6192 Length=7925 Score = 385 bits (426), Expect = 1e-104 Identities = 404/518 (78%), Gaps = 21/518 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCC---AAAAGAGCCCTGTATCAGTATTTATTGTCACTA 57 |||||||||||||||||| | | | | ||| || |||| ||||| | ||||||| Sbjct 6533 GTACTCATTCCAATTACAGGGCTTCGGATATGAGTCCGGTATTGTTATTTTTGGTCACTA 6592 Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||||| | |||| |||||||||| ||||| |||||| |||||| |||||||||||| Sbjct 6593 CCTCCCCGAGCTGGGAGTGGGTAATTTACGCGC-TGCTGC-TTCCTTAGATGTGGTAGCC 6650 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| Sbjct 6651 GTTTCTCAGGCTCCCTCTCGGGAATCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 6710 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 6711 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 6770 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCACCAAGGAGCCCCGAAGG 292 | |||| |||| ||| || | ||||| || | || || || | | | Sbjct 6771 GTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATAAAACGATCTTGCGA 6829 Query 293 GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTT--TAGCATG 348 || | | |||| |||||||| ||| | |||| || ||| | ||||| | ||||| Sbjct 6830 TCGCTTGGTTTTAGCCTAATAAAAGCACACGTTCCAAAAGGTCCGTGTTTTAATTGCATG 6889 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACGAT 406 ||||||||||||||||||||| |||||||| ||| | || || ||| || ||| || Sbjct 6890 TATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACCAT 6947 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||| ||||||||| | || |||||||||| || | | | |||||||||||||| Sbjct 6948 AACTGATATAATGAGCCTTGTGCGGTTTCACTGT-TAATTCGTGTGTACTTAGACATGCA 7006 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||| ||||||||||||||| ||||||||||| Sbjct 7007 TGGCTTAATC-TTGAGACAAGCATATAACTACTGGCAG 7043 >seq6828 Length=421677 Score = 383 bits (424), Expect = 5e-104 Identities = 406/518 (78%), Gaps = 23/518 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCC--AAAAGAGCCCTGTATCAGTATTTATTGTCACTAC 58 |||||||||||||||||| | | | | | ||| | ||||| ||||| | |||||||| Sbjct 170099 GTACTCATTCCAATTACAGGGCTCGGATATGAGTC-TGTATGT-TATTT-TCGTCACTAC 170155 Query 59 CTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCC-TTCCTTGGATGTGGTAGCC 117 ||||||| | |||| |||||||||| |||| |||||||| ||| || |||||||||||| Sbjct 170156 CTCCCCGAGCTGGGAGTGGGTAATTTACGCG-CTGCTGCCTTTCTTTAGATGTGGTAGCC 170214 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 ||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||| Sbjct 170215 GTTTCTCAGGCTCCCTCTCCGGATTCGAACCCTGATTCCCCGTTACCCGTTGCAACCATG 170274 Query 178 GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237 |||| || || |||||||| ||||||||||||||||| ||||||| || | ||| || Sbjct 170275 GTAGTCCTAGATACTACCATCAAAAGTTGATAGGGCAGACATTTGAAAGATCTGTCGTCG 170334 Query 238 GCTCAAGGCCATGCGATTCGTTAAGTTAT-TA----TGAATCACCAAGGAGCCCCGAAGG 292 | |||| |||| ||| || | ||||| || | || || || | | | Sbjct 170335 GTACAAGACCATACGA-TCTGCATGTTATCTAGAGTTCAACCAATAAAACGATCTTGCGA 170393 Query 293 GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTT--TAGCATG 348 || | | |||| |||||||| ||| | |||| || ||| | ||||| | ||||| Sbjct 170394 TCGCTTGGTTTTAGCCTAATAAAAGCACACGTTCCAAAAGGTCCGTGTTTTAATTGCATG 170453 Query 349 TATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT--ACTATCAAATAAACGAT 406 ||||||||||||||||||||| |||||||| ||| | || || ||| || ||| || Sbjct 170454 TATTAGCTCTAGAATTACCACAGTTATCCAAGTA--ACTGTTAACGATCTAAGGAACCAT 170511 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||| ||||||||| || || |||||||||| || | | | |||||||||||||| Sbjct 170512 AACTGATATAATGAGCCTTTTGCGGTTTCACTGT-TAATTCGTGTGTACTTAGACATGCA 170570 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||| ||||||||||||||| ||||||||||| Sbjct 170571 TGGCTTAATC-TTGAGACAAGCATATAACTACTGGCAG 170607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510296673536