Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq6840 87.8 2e-12 >seq6840 Length=32352404 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 162744 ACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGA 162803 ||| || |||||||| |||| ||||| || ||||| |||||| ||||||| |||| || Sbjct 1635536 ACGCGATTGGGGACATGCCAGCGACTATGTGGAGGCCATGTGGATGATGCTGCAGCGTGA 1635595 Query 162804 GAAGCCAGATGATTATGTGATCGCAACTGGTGA 162836 | ||| | ||||||||||| ||||||||||| Sbjct 1635596 CACGCCTGCAGATTATGTGATTGCAACTGGTGA 1635628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691400071595160