Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20mojavensis_20[refseq_20GCF_5F000005175.2_202006-06-30] 6,841 sequences; 193,826,310 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq6841 89.7 2e-12 >seq6841 Length=34148556 Score = 89.7 bits (98), Expect = 2e-12 Identities = 111/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Plus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| ||||||||||||||||||| | | || |||||||| || || ||| ||| || Sbjct 13717832 CCAATTGTCATACGAGAGGGAATGGCGTGGGGATTGATGATAATATCTGGCGCCAATCCC 13717891 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAGGA-AC--GATGAGACCAATGGTTCCCTTTTGC 364540 || ||| || ||||| || || || || || |||| ||| |||||||| ||| Sbjct 13717892 TCGCAGGTGAACGGCATGTCCTCCTGACGATACTGGATG---CCACATGTTCCCTTCTGC 13717948 Query 364541 GCATAGCGAGAAGCAAACTTGTCGCCAAT 364569 | | ||||| || |||||||||||||| Sbjct 13717949 CCGTGACGAGAGGCGAACTTGTCGCCAAT 13717977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884721189118013