Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1865 183 6e-44 seq6417 138 2e-30 >seq1865 Length=1906 Score = 183 bits (202), Expect = 6e-44 Identities = 238/325 (73%), Gaps = 7/325 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||| ||| |||||| ||| | ||||||||| ||| ||||| || | | | Sbjct 185 AGGGGAGTGAAAGAGATCCTGAAACCGTGTGCCTACAAGTAGTCAGAGCCC-GTTAATGG 243 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA-GCGAGGTTAAG 129 |||| ||||||||||||| | ||||| || ||||||| || ||| || |||||||| Sbjct 244 GTGATGGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA--CGATCCCATGCAAGGTTAAG 301 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | |||| ||||| || ||||||||| || || |||||| ||| |||| Sbjct 302 CTGATAAGGCGG---AGCCGTAGCGAAAGCGAGTCTGAATAGGGCGTTTAGTATGTGGTT 358 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||||||| | |||| |||||| |||||| | ||| Sbjct 359 GTAGACCCGAAACCAGGTGATCTACCCATGTCCAGGGTGAAGTTCAGGTAACACTGAATG 418 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| |||||||||||| |||||| | |||||| || |||| Sbjct 419 GAGGCCCGAACCCACGCACGTTGAAAAGTGCGGGGATGAGGTGTGGGTAGCGGAGAAATT 478 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 |||||| ||| ||| |||||| || Sbjct 479 CCAATCGAACCTGGAGATAGCTGGT 503 >seq6417 Length=10883 Score = 138 bits (152), Expect = 2e-30 Identities = 242/340 (71%), Gaps = 18/340 (5%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | || ||||| | ||| ||||| Sbjct 5429 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCTTACAATCCGTCAGAGCC 5487 Query 61 GAGTGATTCGG--TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 ||||| ||| ||||||||||||| | ||||||||| ||||| || || ||| Sbjct 5488 T-----TTCGGGGTGATGGCGTGCCTTTTGAAGAATGAGCCTGCGAGTCAG-CGGCACGT 5541 Query 119 -GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAAC-AGGGCGA 176 |||||||||| | | || | ||| || || |||||||| |||| || | | Sbjct 5542 CGCGAGGTTAACC-CGTGTGG---GGTAGTCGTAGCGAAAGCGAATACTAACTAGTGTGT 5597 Query 177 CG-AGTTG-GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCG 234 | ||| | ||| | || ||| |||| | |||||||||||| | ||| ||||| Sbjct 5598 TGTAGTGGCGTGTC-CTGGACCCGAAGCGGGGTGATCTACCCATGGCCAGTGTGAAGCGA 5656 Query 235 CGGTAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCG 294 ||||| ||| |||||| |||||| | |||||||| | |||||| | | | Sbjct 5657 TGGTAAGACGTCGTGGAGGCGCGAACCCACTTAGGTTGAAAACTGAGGGGATGAGTTGTG 5716 Query 295 GGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||||||||||| | |||||| || Sbjct 5717 GGTAGGGGTGAAAGGCCAATCAAACTCCGTGATAGCTGGT 5756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972351490560