Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq6417 338 9e-91 seq1865 181 1e-43 >seq6417 Length=10883 Score = 338 bits (374), Expect = 9e-91 Identities = 230/257 (89%), Gaps = 10/257 (4%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6903 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 6844 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 6843 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCCACACCAGC-CA 6785 Query 121 ACACGTCG--------TTC-ACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCAT 171 ||| || | | ||||||| ||| ||||||||||||||||||||||| ||| Sbjct 6784 ACAACCCGCAAAAGGCTGCGACCAGCACGGGCCCCCCTTCTCCCGAAGTTACGGGGGCAT 6725 Query 172 TTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACC 231 |||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| Sbjct 6724 TTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTCGGTATACTCTACCAGACCACC 6665 Query 232 TGTGTCGGTTTACGGTA 248 |||||||||||| |||| Sbjct 6664 TGTGTCGGTTTAGGGTA 6648 >seq1865 Length=1906 Score = 181 bits (200), Expect = 1e-43 Identities = 192/248 (77%), Gaps = 10/248 (4%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || ||||| || ||||| || || ||| Sbjct 1437 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACGTCACCTTACGGTTTT-GCAG 1379 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| ||||||||||| | |||||| ||||| | | | ||| Sbjct 1378 AGACCTGTGTTTTTGCTAAACAGTCGCCTGGGCCTATTCACTGCGGCTCTCTCGGGCTTG 1319 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 ||| | | || || |||||||||||||||||||||||||| ||||||||||| Sbjct 1318 -CAC--CCT--ACTAGA----GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAG 1268 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||||| | ||||| | || | |||||| ||||||| | ||| |||||||||||| Sbjct 1267 TTCCTTAACGAGAGTTCTCTCGCTCACCTTAGGATTCTCTCCTCGACTACCTGTGTCGGT 1208 Query 241 TTACGGTA 248 || ||||| Sbjct 1207 TTGCGGTA 1200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694089851665