Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1865 111 2e-22 seq6417 78.8 1e-12 >seq1865 Length=1906 Score = 111 bits (122), Expect = 2e-22 Identities = 138/184 (75%), Gaps = 10/184 (5%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| ||||||| | || || |||||| | ||| ||| || || || Sbjct 1203 CGCAAACCGACACAGGTAGTCGAGGAGAGAATCCTAAGGTGAGCGAGAGAACTCTCG-TT 1261 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGT-CCCTACCCAG----AA 135 |||||||| |||||| |||||| |||||||||||| || |||| | ||| | || Sbjct 1262 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTAGTAGGGTGCAA 1321 Query 136 ATGGGAG---GGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTG 192 ||| | ||||| ||||||| |||||| |||||||| |||||||||||| || || Sbjct 1322 GCCCGAGAGAGCCGCAGTGAATAGGCCCAGGCGACTGTTTAGCAAAAACACAGGTCTCTG 1381 Query 193 CCAA 196 | || Sbjct 1382 CAAA 1385 >seq6417 Length=10883 Score = 78.8 bits (86), Expect = 1e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||| ||| || ||||| ||||| | | ||||| |||||||| Sbjct 6654 AAACCGACACAGGTGGTCTGGTAGAGTATACCGAGGCGTTCGGGTGAACTGTGGTTAAGG 6713 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 || | |||||| || ||| |||||||||||| || ||| Sbjct 6714 AATTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 6751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530962743670