Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1865 100 3e-19 seq6417 84.2 2e-14 >seq1865 Length=1906 Score = 100 bits (110), Expect = 3e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| |||||||||| ||||||||| || ||| |||||||| Sbjct 1344 AGGCCCAGGCGACTGTTTAGCAAAAACACAGGTCTCTGCAAAACCGTAAGGTGACGTATA 1403 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| ||||||||||||||||| |||||||||| Sbjct 1404 GGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAA 1436 >seq6417 Length=10883 Score = 84.2 bits (92), Expect = 2e-14 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA-AAGTGGACGTATAGGGTGTG 126 ||||||||||| ||||||||||| | ||| || ||| |||| || ||||| || || Sbjct 6817 GCGACTGTTTACTAAAAACACAGGTCCGTGCGAAGACGGTAAGTCGATGTATACGGACTG 6876 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||| |||||||||| Sbjct 6877 ACGCCTGCCCGGTGCTGGAAGGTTAA 6902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476587041005