Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1865 318 1e-84 seq6417 248 2e-63 >seq1865 Length=1906 Score = 318 bits (352), Expect = 1e-84 Identities = 322/418 (77%), Gaps = 17/418 (4%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| | | |||||||| ||||||| || ||||||| Sbjct 1630 CGCGGGTAACCTGCATCTTCACAGGTACTATAATTTCACCGAGTCTCTCGTTGAGACAGT 1571 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 1570 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1511 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 |||||||||||||||||||||||||||||||| ||||||||| | | |||||| | Sbjct 1510 TTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGGCTTCGGTTCTCACCTTCGCTTGC 1451 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||| | | |||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct 1450 GCTAAGCAATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCCCCTATACGTCACCTT 1391 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || ||||||||| |||||||||| ||||||||||| ||||| | || || Sbjct 1390 ACGGTTTTGCAGAGACCTGTGTTTTTGCTAAACAGTCGCCTGGGCCTATTCACTGCG--- 1334 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCA--CCTTCTCCCGAAGTTA 358 | || || | | | |||||| || | ||| |||||||||||||||| Sbjct 1333 -----GCTCTCTCG------GGCTTGCACCCT-ACTAGAGCACCCCTTCTCCCGAAGTTA 1286 Query 359 CGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||| | | ||||||| |||||||| | |||||||||| | |||| | ||||||| Sbjct 1285 CGGGGTCATTTTGCCGAGTTCCTTAACGAGAGTTCTCTCGCTCACCTTAGGATTCTCT 1228 >seq6417 Length=10883 Score = 248 bits (274), Expect = 2e-63 Identities = 310/423 (73%), Gaps = 9/423 (2%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||| || | | ||||||| | | | || ||| |||||||| | ||||| Sbjct 7088 GCATCTTTACTCGTACTGCAATTTCGCCGGGCCTGTGGTTGAGACAGCAGGGAAGTCGTT 7029 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 7028 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 6969 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA----GCTAACCC 188 | ||||| ||||||||||| ||||||| || |||||| | | ||||| Sbjct 6968 TAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCCGCTTCGGGCCAAAGCCCTAACAG 6909 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTGTT 247 | |||||||||| ||||||||||||||||| || ||||| || |||| ||| || Sbjct 6908 GTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTT 6849 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA 307 ||| | ||||||||||| ||||||||||| | || | ||| ||||| || | Sbjct 6848 CGCACGGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCCACACCA 6789 Query 308 GCTTA----CGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTG 363 || | | | ||| | ||| ||| ||| | ||||||||||||||||||| | Sbjct 6788 GCCAACAACCCGCAAAAGGCTGCGACCAGCACGGGCCCCCCTTCTCCCGAAGTTACGGGG 6729 Query 364 CCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAAC 423 | ||||||| | |||||| || ||||| | | | ||||| ||||| ||||||| || Sbjct 6728 GCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTCGGTATACTCTACCAGAC 6669 Query 424 CAC 426 ||| Sbjct 6668 CAC 6666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260218708160