Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq80 295 1e-77 seq6417 78.8 2e-12 >seq80 Length=4918 Score = 295 bits (326), Expect = 1e-77 Identities = 214/244 (88%), Gaps = 3/244 (1%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 637 GTCATTAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 696 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | ||||||||||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 697 TGCA-TGGGTGAACAATCCAACGCTTGGTGAATTTTGCTTCACAATGATAGGAAGAGCCG 755 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 756 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 815 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATA 268 ||| |||||||||||||| ||||||| | | ||| || | | |||||||||||| Sbjct 816 CCTATGGTAACTTTTCTGACACCTCTTG-TTAAAAACTCTTTAAACCAAAAGGATCGATA 874 Query 269 GGCC 272 |||| Sbjct 875 GGCC 878 >seq6417 Length=10883 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| |||| ||||| ||||| Sbjct 7655 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACAGCCCAACC 7596 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | | | || | | ||| || ||||||||||||| | |||| Sbjct 7595 CTTGGGACCAACTCCAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCAT 7539 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| |||| || ||||| | |||| |||||||| | |||| ||||| Sbjct 7538 CCCGTCGATATGGACTCTTGGGGAAGATCAGCCTGTTATCCCCGGGGTACCTTTT 7484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854006078880