Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq6417 194 3e-47 seq1865 147 4e-33 >seq6417 Length=10883 Score = 194 bits (214), Expect = 3e-47 Identities = 236/317 (74%), Gaps = 6/317 (2%) Strand=Plus/Plus Query 26 GGATACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCT 85 || ||||||||| | |||| || ||||| |||| || | | ||||||||| ||| Sbjct 7189 GGCTACGCCAGTGGTTGTGGAGTCGTTGTTGAAATACCACTCTGATCGTATTGGATGTCT 7248 Query 86 -AACC--GGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGG 142 |||| || | ||| | | | | ||||||||| | | ||| ||||| ||||||| Sbjct 7249 GAACCTCGGCC--CGTGATCCGGGTCA-GGGACAGTGCCTGGTGGGTAGTTTAACTGGGG 7305 Query 143 CGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACC 202 |||| ||||||||||| ||||||||||||||||||| | |||||||| ||| ||| || | Sbjct 7306 CGGTTGCCTCCCAAAGTGTAACGGAGGCGCCCAAAGGTTCCCTCAGCCTGGTTGGTAATC 7365 Query 203 ATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGA 262 | | | |||| || ||| ||||| | ||||||| || || || ||| |||||||| Sbjct 7366 AGGTGTTGAGTGTAAGTGCACAAGGGAGCTTGACTGTGAGACTGACAGGTCGAGCAGGGA 7425 Query 263 CGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAA 322 ||||||||||| || ||||||||| | ||||| | ||||||| |||||||| Sbjct 7426 CGAAAGTCGGGACTAGTGATCCGGCACCGGCTTGTGGAAGCGGTGTCGCTCAACGGATAA 7485 Query 323 AAGCTACCCTGGGGATA 339 ||| ||||| ||||||| Sbjct 7486 AAGGTACCCCGGGGATA 7502 >seq1865 Length=1906 Score = 147 bits (162), Expect = 4e-33 Identities = 127/155 (82%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 54 TTGGGATACTACCCCTGTTGTATTGGATTTCTAACCGGACGACGTATAACCGTTGACGG- 112 ||||||||||||||| | ||||||| | |||||||| | || | | || | || Sbjct 1748 TTGGGATACTACCCCAGCTGTATTGAAATTCTAACCCGT--ACCCCTGATCGGGGTAGGA 1805 Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 ||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1806 GACAGTGTCAGGCGGACAGTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGCGC 1865 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCG 207 |||||| | ||||||| ||| |||||| ||| || Sbjct 1866 CCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCG 1900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981947064480