Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq6417 650 0.0 seq1865 379 7e-103 >seq6417 Length=10883 Score = 650 bits (720), Expect = 0.0 Identities = 502/591 (85%), Gaps = 19/591 (3%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 ||||| ||| |||||| |||||||||||||||| ||||||||||||||| |||||||||| Sbjct 5919 TCGACCACGAAGCTTA-TCCCCCGCAGTCTCACTGCCGCGCTCTCACTTACCGGCATTCG 5861 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| ||| |||| | | | ||| || |||| ||||| ||||||||||| Sbjct 5860 GAGTTTGGCTGACGTCGCTAAGATGATAGTCCCGCTCAACCAACCAGTAGCTCTACCTCC 5801 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 5800 GGCAAGAAACACACGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGGAG 5741 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 5740 TTTGATTGGCCTTTCACCCCTACCCACAACTCATCCCCTCAGTTTTCAACCTAAGTGGGT 5681 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 ||| |||||||| |||||||| ||||||| ||| |||||| |||||||| ||||| Sbjct 5680 TCGCGCCTCCACGACGTCTTACCATCGCTTCACACTGGCCATGGGTAGATCACCCCGCTT 5621 Query 300 CGGGTCTTGATCGTGCCACTCATACGCCCTA-TTCGGACTCGCTTTCGCTACGGCTACCC 358 |||||| | | |||||| || | ||| || | | |||||||||||||| |||||| Sbjct 5620 CGGGTCCAGGACACGCCACTACAACACACTAGTTAGTATTCGCTTTCGCTACGACTACCC 5561 Query 359 CACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGC 418 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 5560 CACACGGGTTAACCTCGCGACGTGCCGCTGACTCGCAGGCTCATTCTTCAAAAGGCACGC 5501 Query 419 CGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGG 478 | ||||| || ||| |||| ||||||||||| ||||| ||||||||| Sbjct 5500 CATCACC-----CCGAAA---------GGCTCTGACGGATTGTAAGCACACGGTTTCAGG 5455 Query 479 TACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTA 538 |||||||||||||||| || ||||||||||||||| |||||||||||||| | ||||||| Sbjct 5454 TACTATTTCACTCCCCTCCCGGGGTACTTTTCACCATTCCCTCACGGTAC-TATCCGCTA 5396 Query 539 TCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACA 589 ||||||| ||| ||||||| ||||||| |||||||||||| |||||||||| Sbjct 5395 TCGGTCA-CAATGAGTATTCAGGCTTACCGGGTGGTCCCGGCAGATTCACA 5346 >seq1865 Length=1906 Score = 379 bits (420), Expect = 7e-103 Identities = 450/600 (75%), Gaps = 20/600 (3%) Strand=Plus/Minus Query 3 GACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGA 62 ||||||||| |||| || | |||||||| || ||| | | | | | | |||||||||| Sbjct 664 GACTACGGATCTTA-TCACTCGCAGTCTGACTCCCGTG-TATAAATCACTGGCATTCGGA 607 Query 63 GTTTGGTTGATTTCGGTAAGCTTGTG-GGCCCCCTAGACCATCCAGTGCTCTACCTCCGG 121 ||||| ||| |||||||| | | || ||||||| ||| ||||||||||||||| | Sbjct 606 GTTTGTCTGAATTCGGTAATCCGGGATGGACCCCTAGTCCAAACAGTGCTCTACCTCCAG 547 Query 122 GAAGAAACA-CGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180 || || | ||| ||| |||||| ||||||| |||||||||||||| | | || Sbjct 546 GATTCTTCATCACGAGGCTAGCCCTAAAGCTATTTCGGAGAGAACCAGCTATCTCCAGGT 487 Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240 | |||||| |||| || ||| ||||| |||||||| || |||||||| | ||||||| Sbjct 486 TCGATTGGAATTTCTCCGCTACCCACACCTCATCCCCGCACTTTTCAACGTGCGTGGGTT 427 Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300 ||| |||||| | || ||||| | ||||| |||| ||||| |||||||| | | ||| Sbjct 426 CGGGCCTCCATTCAGTGTTACCTGAACTTCACCCTGGACATGGGTAGATCACCTGGTTTC 367 Query 301 GGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCA 360 |||||| | | ||| | ||||||||||| |||||||||||||||||||| | || Sbjct 366 GGGTCTACAACCACATACT-AAACGCCCTATTCAGACTCGCTTTCGCTACGGCTCCGCCT 308 Query 361 CA-CGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419 | | | ||||||| || | || ||||||| || ||||||| ||||||||||||| Sbjct 307 TATCAGCTTAACCTTGCATGGGATCG-TAACTCGCCGGTTCATTCTACAAAAGGCACGCC 249 Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479 ||||| | | || || |||| ||| ||||||||||| ||||||||| Sbjct 248 ATCACC-----CATTAACGG-------GCTCTGACTACTTGTAGGCACACGGTTTCAGGA 201 Query 480 ACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTAT 539 || ||||||||||| | ||||| ||||||||||||||||||||||||| || | |||| Sbjct 200 TCTCTTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACTAT 141 Query 540 CGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599 |||||| | |||||||||||| ||| | |||||| |||||||| ||| |||||| Sbjct 140 CGGTCA-CTAGGAGTATTTAGCCTTGGGAGATGGTCCTCCCAGATTCCGACGGGATTTCA 82 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1816761995520