Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1865 279 1e-72 seq6417 156 1e-35 >seq1865 Length=1906 Score = 279 bits (308), Expect = 1e-72 Identities = 304/391 (78%), Gaps = 11/391 (3%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| || ||||||| |||||| | ||| |||||| | ||| || |||| | Sbjct 445 TTTTCAACGTGCGTGGGTTCGGGCCTCCATTCAGT-GTTACCTGAACTT-CACCCTGGAC 388 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGAC 149 || || |||||| || ||||| |||||||| || | |||| |||||||| | |||| Sbjct 387 ATGGG-TAGATCACCTGGTTT-CGGGTCTACAACC-ACATACTAAACGCCCTATTCAGAC 331 Query 150 TCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTG 208 ||||||| ||||||| |||| ||| || | | | | |||| || ||| |||| | Sbjct 330 TCGCTTT-CGCTACGGCTCCGCCTTATCAGCTTAACCTTGCATGGGATCGTAACTCGCCG 272 Query 209 ACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCA 268 |||| ||||||||| |||| ||||||| || | ||||| ||| |||||| ||| Sbjct 271 GTTCATTCTACAAAAGGCACGCCATCACCCATTAACG--GGCTCTGACTACTTGTAGGCA 214 Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 ||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||| Sbjct 213 CACGGTTTCAGGATCTCTTTCACTCCCCT-TCCGGGGTGCTTTTCACCTTTCCCTCACGG 155 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATT 388 |||| ||||||||||||||| | || ||||||||||||||| |||||||| |||| ||| Sbjct 154 TACTGGTTCACTATCGGTCACT-AGGAGTATTTAGCCTTGGGAGATGGTCCTCCCAGATT 96 Query 389 CAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 | ||| |||| |||| |||| | ||||| Sbjct 95 CCGACGGGATTTCACGTGTTCCGCCGTACTC 65 >seq6417 Length=10883 Score = 156 bits (172), Expect = 1e-35 Identities = 264/365 (72%), Gaps = 18/365 (5%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 |||||||| ||| |||||| |||||| || ||||| | | |||| ||| || Sbjct 5698 TTTTCAACCTAAGTGGGTTCGCGCCTCCACGACGTC-TTACC-ATCGCTTCACACTGGCC 5641 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGA-CGCCCTAGTAAG- 147 || || |||||| ||| | || |||||| | | | || |||| | | | ||||| || Sbjct 5640 ATGGG-TAGATCACCCCGCTT-CGGGTCCAGGACAC-GCCACTACAACACACTAGTTAGT 5584 Query 148 ACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTGCCAC-TGAAAATAAGTCGC 206 | ||||||| ||||||| || ||| | ||| | | | | || || || | | |||| Sbjct 5583 ATTCGCTTT-CGCTACGACTACCCCACACGGGTTAACCTCGCGACGTGCCGCTGACTCGC 5525 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 | | |||| | ||||||| |||| |||||| || ||||| || | ||||| | Sbjct 5524 AGGCTCATTCTTCAAAAGGCACGCCATCACCCCGAAA----GGCTCTGACGGATTGTAAG 5469 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 || ||||||||||| |||||||||||||||| ||||||| |||||| || ||||||||| Sbjct 5468 CACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCATTCCCTCAC 5410 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGT-AGTATTTAGCCTTGGAGGATGGTCCCCCCAT 385 ||||||| | | |||||||||| || | |||||| || ||| || ||||||| || Sbjct 5409 GGTACTA-TCCGCTATCGGTCA--CAATGAGTATTCAGGCTTACCGGGTGGTCCCGGCAG 5353 Query 386 ATTCA 390 ||||| Sbjct 5352 ATTCA 5348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241027560320