Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value SEQ45972 212 1e-52 SEQ25974 140 8e-31 >SEQ45972 Length=646 Score = 212 bits (234), Expect = 1e-52 Identities = 206/265 (78%), Gaps = 0/265 (0%) Strand=Plus/Plus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 |||||||| |||| |||| | |||| ||||||||||||||||||||||||||| || Sbjct 360 CGACGGCAGCGGCCCGGTATTCGCCGGCGCCCTGTTCCCGTTCCTGTTCATCACCATCGC 419 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 ||| ||||| | || || ||||| |||||| ||||| ||||||||||| ||| || | Sbjct 420 CTGCGGCGCCATTTCCGGCTTCCACGCGCTGGTCTCCAGCGGCACCACGCCGAAGCTGGT 479 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 | | || ||||| ||| | ||||||||||||| |||||||||||| || ||||| Sbjct 480 GGAGCGCGAAAGCCACATCCGCTTTATCGGTTACGGCGCCATGCTGATGGAATCTTTCGT 539 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAA 240 |||||||||||| | | |||||||||| | || || ||||| |||||||||||||| Sbjct 540 CGCCATCATGGCGCTTATCTGCGCCTCGGTGCTGGATCCGGGCGTTTACTTCGCCATGAA 599 Query 241 CAGCCCGGCTGCCATTGTCGGCACC 265 | ||||| || | |||||||| Sbjct 600 CTCGCCGGCGGCGCTGATCGGCACC 624 >SEQ25974 Length=1453 Score = 140 bits (154), Expect = 8e-31 Identities = 128/162 (79%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 31 CCTGTTCCCGTTCCTGTTCATCACCATTGCCTGTGGCGCGGTCTCGGGTTTCCATGCGCT 90 ||| ||||||||||| ||| |||| || ||||| ||||| | || || ||||| ||||| Sbjct 713 CCTCTTCCCGTTCCTCTTCGTCACTATCGCCTGCGGCGCCTTGTCCGGGTTCCACGCGCT 654 Query 91 GATCTCCTCGGGCACCACGCCCAAGTTGCTCGCCAGTGAGAGCCATGCCCGTTACATCGG 150 ||||||||| |||||||| || ||| || | | || |||| |||| | | | || Sbjct 653 GATCTCCTCCGGCACCACCCCGAAGCTGGTGCAGAAGGAACGCCAGACCCGCTCCCTGGG 594 Query 151 TTACGGCGGCATGCTGATGGAGTCGTTCGTGGCCATCATGGC 192 ||||||||||||||||||||||| |||||||| |||||||| Sbjct 593 CTACGGCGGCATGCTGATGGAGTCCTTCGTGGCGATCATGGC 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161064444320