Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value SEQ44917 113 1e-22 SEQ44795 86.0 1e-14 >SEQ44917 Length=527 Score = 113 bits (124), Expect = 1e-22 Identities = 246/365 (67%), Gaps = 15/365 (4%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 |||||||||||| ||||||||||| | ||||||||||| || ||||| | || || Sbjct 169 CGATGGTCAGCAGATCGCCGCCCACTTCCGTCCACGCCAGCCCGGTGACTTCGCCCACGC 228 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGG 120 | | | || || ||||||| || ||||||| ||| ||| || |||| Sbjct 229 GGTTTTCGGTATCCGCACGGCCGTAATCGACGCGCTGCACGCCCAGGTAGTCCTTCAGGA 288 Query 121 AGTCGGCCGTGACCTTCACCGAGAAGCGT-------TTTTCCAGC-GCAT-GTTCCTTGA 171 |||| | ||| || ||| || | || |||| | ||| ||| || | Sbjct 289 TGTCGCCGTTGATCT----CGATGTGCTTGCGCTTCTTATCCATCAGCAGCGTT--TTCA 342 Query 172 CCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGG 231 |||| || ||||| | || | ||| | |||||||||| ||||| ||||||||||||| Sbjct 343 CCGCTTTACGGCACAGTTTAGAGATTTCACGCTCCAGGCTGCGCACCCCGGCTTCGCGGG 402 Query 232 TGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCA 291 ||||| |||| | |||| || ||| | || | | || | | |||||| || |||| Sbjct 403 TGTAGAAGCGAATGATGCCGATGATGGCGCTGTCGTCGACCGTCAGCTCGCCTTTTTTCA 462 Query 292 GGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGT 351 | | ||| | || |||||| ||| |||| | |||||||||||| ||| |||| Sbjct 463 GCGCGTTGCGCTCAAGCTGCTTAGGCAGCAGGTGCAGTTTGGCGATGTTGAGCTTTTCGT 522 Query 352 CTTCG 356 | ||| Sbjct 523 CCTCG 527 >SEQ44795 Length=753 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 278 CTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGAT 337 |||||| || || || | ||| | |||||| || ||| |||| || ||||||| Sbjct 752 CTCGCCTTTTTTGAGTGCGTTGCGCTCAATCTGTTTCGGCAGCAGGTGCTGTTTGGCGAT 693 Query 338 GTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 ||||| ||| ||||| ||||| ||||||| ||| || | ||||||||| |||||||| Sbjct 692 GTTGAGCTTTTCGTCCTCGGTATAACCCGACAGACGGAGCACTTCCATACGGTCCAG 636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1157865919680