Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq6417 416 7e-114 seq1865 104 5e-20 >seq6417 Length=10883 Score = 416 bits (460), Expect = 7e-114 Identities = 341/411 (83%), Gaps = 13/411 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| Sbjct 6325 CGACTACGCCTGTCGGCCTCGCCTTAGGCCCCGACTCACCCTGGGAAGACAAACTTGACC 6266 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | ||||||||| | | |||||||| | | ||| ||| | ||| ||||||||||||||| Sbjct 6265 CAGGAACCCTTAGTCATTCGGCGGATGAGTTTCTCACTCATCAATCGCTACTCATGCCTG 6206 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 ||||||||||||||| ||||| ||| ||||||| ||| ||||||| ||||||| Sbjct 6205 CATTCTCACTCGCATAGCCTCCAGCACTGGGTCACCCCGCACCTTCACCGGCCACACGAC 6146 Query 181 GCTCCCCTACCCAACCACACAG------GT----TGCCACAGCTTCGGCGGATAACTTAA 230 ||||||||||| ||||||||| || | || | |||||||||| |||||| Sbjct 6145 GCTCCCCTACC-AACCACACACAACAGTGTGCAGTTCCGCGGCTTCGGCGGTGTACTTAA 6087 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 ||||| ||||||| ||||||| |||| |||||||||||||||||||||||| |||| Sbjct 6086 GCCCCACTACATTGTCGGCGCACGGCCACTCGACCAGTGAGCTATTACGCACTCTCTCAA 6027 Query 291 GGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACT 350 ||||||||||||| ||||||||||||||| ||||| ||| || |||||||||| ||||| Sbjct 6026 GGATGGCTGCTTCTAAGCCAACCTCCTGGCTGTCTTCGCGACCGCACATCCTTTTCCACT 5967 Query 351 GAGT-CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || |||| ||||||||||||||| | |||||||||||||||||||||| Sbjct 5966 TAGCACACC-CTTAGGGGCCTTAGCCGGCGATCTGGGCTGTTTCCCTCTCG 5917 >seq1865 Length=1906 Score = 104 bits (114), Expect = 5e-20 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 || |||||||||||||||||| |||||| ||||||| |||| | | ||| | | | | Sbjct 972 CGCCTACGCCTGTCGGCCTCGGCTTAGGTCCCGACTAACCCTGAGAGGACGAGCCTTCCT 913 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 | |||| |||| | | |||| ||| ||||||| ||||| || |||||||||| || | Sbjct 912 CAGGAAACCTTAGTCATTCGGTGGATGGGATTCTCACCCATCTTTCGCTACTCATACCGG 853 Query 121 CATTCTCACT 130 |||||||||| Sbjct 852 CATTCTCACT 843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177057067520