Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq6417 237 3e-60 >seq6417 Length=10883 Score = 237 bits (262), Expect = 3e-60 Identities = 223/283 (79%), Gaps = 1/283 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||||||||||||||||||||| | |||| | ||||||||||||| ||||| Sbjct 3784 CCCACGCTTTCGCGCCTCAGCGTCAGTTACAGACCAGAGAGCCGCCTTCGCCACCGGTGT 3725 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||||||||||||||| |||||||| | || || |||||| Sbjct 3724 TCCTCCAGATATCTGCGCATTTCACCGCTACACCAGGAATTCCAGTCTCCCCTACAGCAC 3665 Query 121 TCAAG-AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| | | || || |||| || | ||||||||| ||||||| ||| Sbjct 3664 TCAAGTTATGCCCGTATCGCCTGCACGCCCGGAGTTGAGCCCCGGAATTTCACAGACGAC 3605 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 | | || ||||| || |||||| |||| ||| |||||| |||||| || ||||| Sbjct 3604 GCGACAAACCACCTACGAGCTCTTTACGCCCAGTAATTCCGGACAACGCTCGCACCCTAC 3545 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 ||||||||||||||||||||||||||||||||| |||| ||| Sbjct 3544 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTCTTC 3502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828429822955