Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value SEQ45988 138 2e-30 >SEQ45988 Length=540 Score = 138 bits (152), Expect = 2e-30 Identities = 135/174 (78%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 121 TCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTG 180 || |||||||| || || |||||||||| |||||| | || || |||| |||||||| Sbjct 537 TCGACGTTGCCGACCTGCATCATGCGTTTCTTACCGTCTTTCTGTTTCTGCAGCAGCTTT 478 Query 181 CGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTG 240 ||||||||| |||||||||||||||||||| ||||| ||||| || | || || Sbjct 477 TTCTTACGGCTGACGTCACCGCCGTAGCATTTCGCCAGCACGTTTTTACGCAGCTGTTTC 418 Query 241 ACGGAGGTCCGCGCAATGATCTGCCCGCCAATGGCGGCCTGGATCGCGACGTCG 294 |||| || ||||| ||||| ||| ||| || || ||||| ||||||| |||| Sbjct 417 ACGGTGGAGCGCGCGATGATGTGCGTGCCGATCGCCGCCTGAATCGCGATGTCG 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838013455680