Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq6417 215 1e-53 >seq6417 Length=10883 Score = 215 bits (238), Expect = 1e-53 Identities = 302/419 (72%), Gaps = 21/419 (5%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 |||||||||||||||||||| ||| |||||||| | ||| |||||| ||| || ||||| Sbjct 3460 TTTACAACCCGAAGGCCTTCATCACTCACGCGGCGTTGCTCCATCAGACTTTCGTCCATT 3401 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 ||| || |||||| ||||||||||||||||||||| ||| |||||||||||| ||| ||| Sbjct 3400 GTGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGTCCCAATGT 3341 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||| |||||||| | |||| | |||||||||| ||| |||| ||||||| ||| Sbjct 3340 GGCCGATCACCCTCTCAGGTCGGCTATGCATCGTCGCCTTGGTAGGCCGTTACCCCACCA 3281 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGC------CCGAAGGTCCCCCT 238 ||||||| || | | |||||| | || | | || || || Sbjct 3280 ACTAGCTGATAGGCCGCGAGCTCATCCTGCACCGAAAAACTTTCCACCACCAGTACCAAC 3221 Query 239 CTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCC--CCTCC 296 | ||||| ||| ||||||||| | | |||||| | ||||||| | | Sbjct 3220 CAATGGTC--------CTATCCGGTATTAGACCCAGTTTCCCAGGCTTATCCCGAAGTGC 3169 Query 297 ATCAGGCAG-TTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGC 355 | ||||| | |||| |||||||||||| ||||||||| | || |||||| Sbjct 3168 A--GGGCAGATCACCCACGTGTTACTCACCCGTTCGCCACTCGAGTAC-CAGGTGCAAGC 3112 Query 356 TGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | | || ||||||||||||||||||||| || ||||||||||||| ||||| Sbjct 3111 ACCCGGC-CTTTCCGTTCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCGTCCTGAG 3054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221836412480