Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq6417 390 3e-106 >seq6417 Length=10883 Score = 390 bits (432), Expect = 3e-106 Identities = 378/480 (79%), Gaps = 18/480 (4%) Strand=Plus/Plus Query 22 GAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACC 81 ||| |||| ||||||||||||| ||||||| | |||||||| || |||||| Sbjct 3129 GAGTGGCGAACGGGTGAGTAACACGTGGGTGATCTGCCCTGCACTTCGGGATAAGCCTGG 3188 Query 82 GAAA---GGTATGCTAATACGAGATAATATACTTTTATCGCA-TGGTAGAAGTATCAAAG 137 |||| ||| ||||||| |||| | || | | | |||| | | |||| Sbjct 3189 GAAACTGGGT---CTAATACCGGATAGGACCATTGGTTGGTACTGGTGGTGG----AAAG 3241 Query 138 CTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACC 197 | |||| |||||| | |||| | || ||||||||||| ||||||||| |||| Sbjct 3242 TTTTT-CGGTGCAGGATGAGCTCGCGGCCTATCAGCTAGTTGGTGGGGTAACGGCCTACC 3300 Query 198 AAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGG 257 ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 3301 AAGGCGACGATGCATAGCCGACCTGAGAGGGTGATCGGCCACATTGGGACTGAGACACGG 3360 Query 258 TCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGC 317 ||||||||||||||||||||||||| |||||| || |||||||| | |||| |||||| Sbjct 3361 CCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGAAAGTCTGATGG 3420 Query 318 AGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA- 376 |||||||||||||||| ||||||||||||||||| ||||| || || | | || || Sbjct 3421 AGCAACGCCGCGTGAGTGATGAAGGCCTTCGGGTTGTAAACTCCTTTCAACCATGACGAA 3480 Query 377 ----TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA 432 | |||||||| | | || ||||| |||||||||||||||||||||||||||||| Sbjct 3481 GCTTTTGTGACGGTAGTGGTAGAAGAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTA 3540 Query 433 ATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTT 492 |||||||||| || |||||| |||||||||||| |||||||||| | |||||||||||| Sbjct 3541 ATACGTAGGGTGCGAGCGTTGTCCGGAATTACT-GGGCGTAAAGAGCTCGTAGGTGGTTT 3599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496909531520