Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq80 453 4e-125 SEQ19642 82.4 2e-13 >seq80 Length=4918 Score = 453 bits (502), Expect = 4e-125 Identities = 325/375 (87%), Gaps = 13/375 (3%) Strand=Plus/Plus Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC--C 229 ||||| || || | ||||||| |||| ||||| |||||||||||||| | || | Sbjct 1238 GTTCCATTTAATCAAGTAAGTAAGGAAACAATAAGAGTAGTGGTATTTCATTGTCGATAC 1297 Query 230 GAAACGG-----------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCG 278 |||| | |||||||||||||||||||||| | ||| | ||| | | Sbjct 1298 TAAACCGAAATTTAATATCTCCCACTTATTCTACACCTCTTATGTCTCCTTACACTGCCA 1357 Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 || ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| Sbjct 1358 GATTAGAGTCAAGCTCAAAAGGGTCTTCTTTCCCCGCTAATTATTCCAAGCCCGTTCCCT 1417 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1418 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGAATCTCGTTAATCCATTCATG 1477 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1478 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 1537 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 518 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1538 CCGTTGACCCGCGCTTACTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAAT 1597 Query 519 CACATTGCGTCAACA 533 ||||||| ||||||| Sbjct 1598 CACATTGTGTCAACA 1612 Score = 89.7 bits (98), Expect = 2e-15 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||| | | ||||||| | | |||| |||| |||||||| |||||| Sbjct 933 CTTTTGCTCTATGTGTGGTTTCTGTCCGCACTGAGCTGGCCTTGGGACACCTCCGTTATT 992 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| | |||||| ||||||||| ||||||||| ||||| ||||||| Sbjct 993 ATTTGAGAGATGTACCGCCCCAGTCAAACTCCCTACCTGGCAATGTC 1039 >SEQ19642 Length=1970 Score = 82.4 bits (90), Expect = 2e-13 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 ||||||||||| || ||||||||| ||||||||||||||||| |||||||||||| Sbjct 672 TAGATAGGGACGGTAGGAATCTCGCTAATCCATTCATGCGCGACACTAATTAGAT 726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634446091040