Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq6417 796 0.0 seq1865 361 2e-97 >seq6417 Length=10883 Score = 796 bits (882), Expect = 0.0 Identities = 518/565 (92%), Gaps = 8/565 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct 7418 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTACACTCAACACCTGATTACC 7359 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 7358 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACACTTTGGGAGG-CAACCGCCCCAG 7300 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTT-AGATATCCA 179 |||||||||||||||||||||||||| |||| ||||| ||||| ||||| ||| ||||| Sbjct 7299 TTAAACTACCCACCAGGCACTGTCCCTGACCCGGATCACGGGCCGAGGTTCAGACATCCA 7240 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 |||| |||||||||||||||||||||||||||||||||||| |||| ||||| ||| || Sbjct 7239 ATACGATCAGAGTGGTATTTCAACAACGACTCCACAACCACTGGCGTAGCCGCTTCACAG 7180 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 7179 TCTCCCACCTATCCTACACAAACCGAACCGAACACCAATACCAAGCTATAGTGAAGGTCC 7120 Query 300 CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCG 359 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 7119 CGGGGTCTTTTCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTACTGCAATTTCGCCG 7060 Query 360 GGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 419 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 7059 GGCCTGTGGTTGAGACAGCAGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 7000 Query 420 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6999 GACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTA 6940 Query 480 AATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCG 539 |||| |||| | | ||| | || || ||||||||||||||||||||||| Sbjct 6939 AATTCTCCGCTT--CGGGCCA----AAGCCCTAACAGGTCCTCTTAACCTTCCAGCACCG 6886 Query 540 GGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||||||||||| ||| Sbjct 6885 GGCAGGCGTCAGTCCGTATACATCG 6861 >seq1865 Length=1906 Score = 361 bits (400), Expect = 2e-97 Identities = 392/513 (76%), Gaps = 14/513 (3%) Strand=Plus/Minus Query 53 TGATTGCCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAAC 112 ||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| | || Sbjct 1896 TGATTTCCAACCATTCTGAGGGAACCTTTGGGCGCCTCCGTTACTCTTTAGGAGG-CGAC 1838 Query 113 CGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAG 172 ||||||||| ||||| || || | ||||||| || |||| ||||| ||| |||||| Sbjct 1837 CGCCCCAGTCAAACTGTCCGCCTGACACTGTCTCCTACCCCGATCAGGGGTACGGGTTAG 1778 Query 173 ATATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGC 232 | | || ||| | | || |||| ||| ||| |||||| || ||| | | Sbjct 1777 AATTTCAATACAGCTGGGGTAGTATCCCAAGGACGCCTCCACCGAAGCTGGCGCTCCGGT 1718 Query 233 ATCATAGTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTG 292 ||| | |||| ||||||||| |||| | | ||| || ||||| || |||| ||| Sbjct 1717 TTCAATGGCTCCTACCTATCCTGTACAAGCTGTACCAAAATTCAATATCAGGCTACAGTA 1658 Query 293 AAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| ||| |||||||||| ||||||| |||| | ||| ||||||| || ||||| || Sbjct 1657 AAGCTCCACGGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTTCACAGGTACTATAA 1598 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| | || | |||||||||| | || |||||||||| ||||||| |||||| Sbjct 1597 TTTCACCGAGTCTCTCGTTGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 1539 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| Sbjct 1538 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTAC 1479 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 ||||||||| || ||||| | || || ||| | | ||| ||||||||| Sbjct 1478 TGGGGCTTCGGTT------CTCAC---CTTCG-CTTGCGCTAAGCAATCCCCTTAACCTT 1429 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||||||||||| || ||||| || Sbjct 1428 CCAGCACCGGGCAGGCGTCAGCCCCTATACGTC 1396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701615108480