Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value SEQ36764 93.3 1e-14 >SEQ36764 Length=622 Score = 93.3 bits (102), Expect = 1e-14 Identities = 248/377 (66%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 38066 GACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGG 38125 ||| | ||| |||||| ||||| || || ||| |||| |||||| |||| | Sbjct 480 GACAATATGGCGCTGCCCCCGTGCCACCTGCTGTTCCAGCTCTACGTCGCCGACGGGACG 421 Query 38126 TTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATC 38185 |||| ||| | | |||||| || || | ||| | || ||||||| |||||| Sbjct 420 CTGTCCTGCCAGCTCTACCAGCGCAGCGCGGACATGTTCCTCGGCGTGCCGTTCAACATC 361 Query 38186 GCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGAA 38245 || |||||||||| ||| || ||| | ||||| || | | |||| ||||| || Sbjct 360 GCCTCCTACGCGCTGCGGACCCACATGTTCGCCCAGCAGGCGGGCCTGGAGGTCGGCGAG 301 Query 38246 CTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTG 38305 | | | |||||||||||| ||| | ||| | | || || || || | | ||| Sbjct 300 TGCGTGTGGACCGGCGGCGACTGCCACATCTACGACATCCACCTCGACCAGGTGCGGCTG 241 Query 38306 CAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGCCGTCT 38365 ||||||| || ||| | ||||| || | || |||| | ||| ||| | | Sbjct 240 CAGCTGAGCCGGGAGGCCCGCCCCGCCCCCACACTGACGCTGCACCGGGCACCG--GAC- 184 Query 38366 ATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGATT 38425 || || ||| | | ||||||| | || || ||||||||| ||||| || | || Sbjct 183 ATGTTCAGCTACGGCTTCGACGACATCGAGGTCACCGGCTACGACCCGCACCCCGGCATC 124 Query 38426 AAAGCACCGGTGGCGGT 38442 || || ||||||||||| Sbjct 123 AAGGCTCCGGTGGCGGT 107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130568475008250