Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq61 531 4e-146 seq2872 394 7e-105 >seq61 Length=55249 Score = 531 bits (588), Expect = 4e-146 Identities = 1248/1863 (67%), Gaps = 57/1863 (3%) Strand=Plus/Minus Query 65080 GACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTT 65139 ||| ||||| || || ||||| ||||| | ||| || | ||||| ||||| || ||||| Sbjct 28003 GACTGTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCTGTCTT 27944 Query 65140 GAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGC 65199 |||||| || ||| | ||||||| || |||| ||| || | || || || ||||| Sbjct 27943 GAGGCCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGTTCGGC 27884 Query 65200 CACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTC 65259 || || || || || || |||||||| || || || ||| ||||| || ||||| | Sbjct 27883 AACGTGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCCATCTT 27824 Query 65260 AATGATACGACGTC-CCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTG 65318 ||| | ||| || |||| || ||||||||||| ||||| || ||||| || | Sbjct 27823 GATGGTT-GACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCCTGAG 27765 Query 65319 GAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCGACT 65378 |||| || |||| || | || ||||||| ||||| || |||| ||| | Sbjct 27764 GAATGGATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATGTCAT 27705 Query 65379 CTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACT 65438 | ||| ||| | | ||| | | || | | ||| ||| |||| | || | ||||| Sbjct 27704 CATCCCATAAATCTAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTGAACT 27645 Query 65439 CGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGT 65498 | ||||||| || || | | || ||||| || || || |||||||| ||| | | Sbjct 27644 CTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCATTAT 27585 Query 65499 TGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC--- 65555 | || | || |||||||||||||| || ||||| ||||| || | || ||||||| Sbjct 27584 TACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCTACAAGCAGCGAGTTTCTAA 27525 Query 65556 -GCAATCCG--TTCATTT-CAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTA 65611 || || | || |||| |||| || || ||| | ||| | ||| | || || Sbjct 27524 CGCCATGCTCTTTGATTTTCAATTTTA-GA-GCAGT-----CCAATCCCAAA--GGCTTG 27474 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCG 65671 | | | | | | ||||||||| | ||||| |||| | || |||| |||| Sbjct 27473 TGGGTGTCTT----GTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCA 27418 Query 65672 AGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCA 65731 | | | || || || |||| | || || | ||| |||| ||| || || || Sbjct 27417 GCGTAGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCA 27358 Query 65732 AAATAAATGGTCTCGAAAATGCGTCGATTAAGTTC-ACGTGCCTCATCGCTCTCGTACGG 65790 | || ||||| ||||| || | |||| || ||| || | || ||||| || || Sbjct 27357 TAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAATACG-GCTTTGTCACTCTCATAGGG 27299 Query 65791 CATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATG 65850 | || |||||| | || | |||||| | || ||||| ||||| || ||||||||||| Sbjct 27298 AAAACGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATG 27239 Query 65851 ACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATT 65910 | |||||||| | ||||| || | || |||||||||||||| || || || Sbjct 27238 TCTTAAATTGGATTTCTTTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTT 27179 Query 65911 CAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAATGTTTA 65968 |||||| | || || | | | | || || || || | |||||| || ||||| Sbjct 27178 CAAATTTCTGGTGAC-AGTTTTAGTA-ACTTCCTTCAGTTTCTTGAAATCGAA-TGTTTT 27122 Query 65969 GGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAG 66028 || | ||| ||||||| | | ||| | ||||| | |||||| Sbjct 27121 C-----TCTGAAGT---------CACAAACATATTCAAGGCTATCGATGCCAAATTGCAG 27076 Query 66029 ACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT 66088 || || ||||| || || || | ||| || |||||||| ||||| || || ||||| Sbjct 27075 ACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCAGTGCAGAGGTTGCTGCATTTG 27016 Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 |||||||| | |||||| ||||| ||||| | ||||| | |||||| | | ||||||| Sbjct 27015 ATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCCTTGAAGAGCATGTAC 26956 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 |||||||| ||||||||||| || |||| ||||| | |||||||| |||| || | | Sbjct 26955 GGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAGAGTTTGTGCTTTAATC 26896 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 ||| || | ||| | || ||||| | | || || | || ||| || ||| Sbjct 26895 ACACGATTTGCGCGACCCTCGCTCTCGTACTTTGTATACAGCTTCTCAAAGTCATCCCCC 26836 Query 66269 CATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGT 66328 || || || || | ||||||||||| ||||||| |||||||||||| ||| Sbjct 26835 CAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTCATTGGCC 26776 Query 66329 TCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGT 66388 || ||||| |||||| ||||| |||||||| | ||||||||||||||| || |||| Sbjct 26775 TCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTG 26716 Query 66389 TGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 ||||| || |||| ||| | ||| | | ||| | |||||||||||| |||| |||||| Sbjct 26715 TGCTCTTCCTTGCCCGTGTTCTTTTTG-AGGTCCAAGAACTCAAAGATATCGGAATGCCA 26657 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||||||||||| ||||| || | ||| || |||||||||||||| ||||| || || Sbjct 26656 AGGTTCCAGGTAAATGGCAAAAGCGCCTGGTCGCTTGCCGCCACCTTGATCGACATAACG 26597 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| ||||| || || || | | ||| || || | || || || ||||||| ||||| Sbjct 26596 AGCCACATTATTAAACACTCTGAGCATGGGCACCAAACCATTTGAAGTGCCATTAGTGCC 26537 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 ||| | || || || || ||| || ||||| || ||||| ||||| || | Sbjct 26536 ACAGATCGAGGTGCCCTTGGCACGAATACAATGCACATTGAGCCCAATGCCACCAGCGGA 26477 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTC---ACC 66684 || ||||| ||||| | | || | | ||| ||||| || ||||| || | | Sbjct 26476 TTTGGAGATCATTGCACACTGCTCGACGGACTTGAAAATGCCTTCGATGGAATCGGAAAC 26417 Query 66685 CTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGG---GTTTGGGTGTGGCGGCCGAGAA 66741 | || || | ||| | || || | |||| | ||| ||||| || | || Sbjct 26416 C---ATTGTTAAAAGGAAACACGATGACATCTGGGGACGATTG---GTGGCAGCAGCAAA 26363 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 | || || | || |||||||| || | || | |||||| ||||||| | Sbjct 26362 TAACGTTGGCGATGCATGCGTAAAATAGCGTTCCGATAACAGATTGTAAGTCTCGACAGC 26303 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCG 66861 | ||| |||| ||||||||| || || | || || |||||| | || || || || Sbjct 26302 GGAATCGATGTCTTCGCCATGGATTCCAATCGCCACTCTCATCAGCATGTGCTGCGGACG 26243 Query 66862 TTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAA 66921 |||| | | | ||||| | | || || || || || |||||||||| ||||| Sbjct 26242 TTCGGCGATTTTGCCATTGATCTTTAGCAAATACGAACGCTCGAGGGTCTTGAAGCCAAA 26183 Query 66922 GTA 66924 || Sbjct 26182 ATA 26180 >seq2872 Length=9359 Score = 394 bits (436), Expect = 7e-105 Identities = 603/850 (71%), Gaps = 21/850 (2%) Strand=Plus/Minus Query 61103 AAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATG 61162 || |||| ||||| || |||||||| || || || || ||| ||||||| ||||||| || Sbjct 3815 AACAGGCTGAAGCATCGTTCTGGACCGTCGAAGAAGTGGATCTGTCCAAGGACATGACTG 3756 Query 61163 ACTGGG---AGCGTTTATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCT 61219 | |||| ||| ||| || ||| | |||||||| ||||||||||| |||| Sbjct 3755 ATTGGGCCAAGC--TTACGGATAA-TGAGCGTCATTTCATATCGCATGTGTTGGCCTTCT 3699 Query 61220 TTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGC 61279 |||| ||||| || || || || || || ||| | | |||||||| || || |||| Sbjct 3698 TTGCTGCTTCTGATGGAATTGTTAACGAAAATCTGGTCGAACGTTTTAGCCAAGAAGTGC 3639 Query 61280 AAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339 | ||| | ||||| ||||| || || |||||||||||||||||||||||||| || || | Sbjct 3638 AGGTGACCGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTGCATTCCG 3579 Query 61340 AGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGAT-TG 61398 | ||||||||||| ||||| || || || |||||||| | | || | || || | Sbjct 3578 AAATGTACAGTGTGCTCATTGACACCTATATCAGGGATCCTCATCAGCGAG-ACTATCTC 3520 Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 ||||||||||| || ||||| ||||| || |||||||| || || ||||| | |||| Sbjct 3519 TTCAATGCCATTGAAACGATGCCGGCTGTTAAGCGGAAGGCAGACTGGGCTCTTTCTTGG 3460 Query 61459 ATCACCAGTACAACGGCT---ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||| | | | | |||| | ||||||||||| | | || ||||| | || || Sbjct 3459 ATCTC---TTCGAAGGCTGCCAACTTTGGTGAACGTATTATTGCTTTTGCTGCTGTTGAA 3403 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || |||||||| ||||| | ||||| ||| ||||||| |||||||||||| Sbjct 3402 GGCATCTTCTTCAGTGGGAGCTTTGCATCCATCTTCTGGCTGAAGAAGCGTGGACTTATG 3343 Query 61576 CCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 || || || || ||| ||| || ||||| || ||||| || || |||||||||| ||| Sbjct 3342 CCTGGACTTACATTCTCCAACGAATTGATCTCTCGCGATGAAGGTCTGCATTGTGACTTT 3283 Query 61636 GCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTG 61693 || || | | ||| ||| || ||||| | || || |||| ||| || | || Sbjct 3282 GCGGTGCTTATGTTCCAAC---ATTTGGTGCAGCGGCCTAGTCG--GGAACGCATCATTG 3228 Query 61694 AGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCT 61753 | || | || || || ||||| || ||||| || || || || || |||||||| Sbjct 3227 AAATCATAACGGATGCTGTGACTATTGAGCAGGAGTTCCTCACCGATGCGCTGCCCGTCA 3168 Query 61754 CACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTC 61813 | || |||||||| |||| || ||||| | ||||| || ||||| || || || | Sbjct 3167 ACTTGATTGGCATGAACTGTGCTCTGATGTCCGAATATATCGAGTTTGTCGCTGATCGCC 3108 Query 61814 TGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGG 61873 | ||||| || | || || ||| || || || || || ||||| ||||||| Sbjct 3107 TATTGGTTGAGCTTGGAGTGGGCAAGATTTACAACACAAAGAATCCATTCTCGTTCATGG 3048 Query 61874 ACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAAC 61933 | ||||| || |||||||||| || || || |||||||| || || || ||||| | Sbjct 3047 AGATGATCTCTTTGGATGGCAAAACCAACTTCTTCGAGAAGAAAGTGGGTGAATATCAGC 2988 Query 61934 GTTTGGGTGT 61943 | |||| || Sbjct 2987 GCATGGGAGT 2978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397344604677200