Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20] 46,105 sequences; 137,224,182 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value SEQ11799 84.2 9e-11 >SEQ11799 Length=6542 Score = 84.2 bits (92), Expect = 9e-11 Identities = 188/275 (68%), Gaps = 12/275 (4%) Strand=Plus/Minus Query 21633 ACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTTTTGC 21692 ||||| || |||||| | || |||||||||||| || || ||| | ||| | Sbjct 4427 ACACCAGTTGAGCCAAAGCCACCCTCGCCGCGCACTGTGTC------CTC-CAGTTTGTC 4375 Query 21693 G-CCTGCTGCAAAACTGGGGTCG-AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGC 21750 | |||||| || | ||| | | |||||||||| |||| |||||| |||||||| | Sbjct 4374 GACCTGCTCCAGCTC-GGGATAGAAGATGCGTTCGCAAATGAATTGGGCAATGCGATCAC 4316 Query 21751 CATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCC 21810 || |||| | || || || || ||||| ||||| || || || || | ||||| | Sbjct 4315 CACGCTTCACCTCGAAATCGGCATCGGAGTGATTGAACAGTACAACACCTAGATTGCCGC 4256 Query 21811 TATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCC 21869 || || || || || || ||||| || ||||||| |||||||| |||| || Sbjct 4255 GAT-AGTCCTCATCTACAACGCCGGCTCCCACGTCGATGAAGTTCTTCACAGCCAAGCCA 4197 Query 21870 GATCTGGGAGCGACGCGGCCGTAGTGGCCCTTTGG 21904 || | || || || ||||| || ||||| ||| Sbjct 4196 GAGCGTGGCGCCACACGGCCATAAGAGCCCTCTGG 4162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083477665676790