Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
SEQ11799 84.2 9e-11
>SEQ11799
Length=6542
Score = 84.2 bits (92), Expect = 9e-11
Identities = 188/275 (68%), Gaps = 12/275 (4%)
Strand=Plus/Minus
Query 21633 ACACCCGTGGAGCCATATCCTCCCTCGCCGCGCTTGGTCTCGCCGAGCTCGCCCTTTTGC 21692
||||| || |||||| | || |||||||||||| || || ||| | ||| |
Sbjct 4427 ACACCAGTTGAGCCAAAGCCACCCTCGCCGCGCACTGTGTC------CTC-CAGTTTGTC 4375
Query 21693 G-CCTGCTGCAAAACTGGGGTCG-AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGC 21750
| |||||| || | ||| | | |||||||||| |||| |||||| |||||||| |
Sbjct 4374 GACCTGCTCCAGCTC-GGGATAGAAGATGCGTTCGCAAATGAATTGGGCAATGCGATCAC 4316
Query 21751 CATGCTTGATTTCAAAGTCCTGGTCAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCC 21810
|| |||| | || || || || ||||| ||||| || || || || | ||||| |
Sbjct 4315 CACGCTTCACCTCGAAATCGGCATCGGAGTGATTGAACAGTACAACACCTAGATTGCCGC 4256
Query 21811 TATAAGAACT-GTCGACGACCCCGGCGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCC 21869
|| || || || || || ||||| || ||||||| |||||||| |||| ||
Sbjct 4255 GAT-AGTCCTCATCTACAACGCCGGCTCCCACGTCGATGAAGTTCTTCACAGCCAAGCCA 4197
Query 21870 GATCTGGGAGCGACGCGGCCGTAGTGGCCCTTTGG 21904
|| | || || || ||||| || ||||| |||
Sbjct 4196 GAGCGTGGCGCCACACGGCCATAAGAGCCCTCTGG 4162
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2083477665676790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |