Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20nasuta_20[genbank_20GCA_5F002222885.1_202017-07-20]
46,105 sequences; 137,224,182 total letters
Query= NC_031076.1
Length=38071
Score E
Sequences producing significant alignments: (Bits) Value
SEQ43844 136 1e-27
SEQ22413 105 2e-18
SEQ32968 89.7 1e-13
>SEQ43844
Length=619
Score = 136 bits (150), Expect = 1e-27
Identities = 223/316 (71%), Gaps = 4/316 (1%)
Strand=Plus/Plus
Query 34859 GAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATACCAAT 34918
|| ||||| ||||||||||| ||||||||| ||||||||||||||||| || |||
Sbjct 1 GACACCCCCATCACCATCGTCGGCAACCTCGTAGCCGACCCCGAACTGCGCTACACCCCG 60
Query 34919 TCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGCAA 34978
|| ||| ||||| |||| | ||||||||||| || ||||| ||| || |||
Sbjct 61 TCCGGCGCCGCCGTGTGCAACGGCCGTGTCGCATCCACCCCCCGCACGTTCAACAAGCAG 120
Query 34979 GCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGCCG 35038
||||| | ||| |||| | ||| || |||||||| ||| | ||||||| ||| |
Sbjct 121 ACCAACCAGTGGGAGGATGCCGAAGCACTGTTCCTCACCTTCAACCTGTGGCGCCAGGCA 180
Query 35039 GCCGAGAACGTGGCCGAATCG-CTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCT 35097
|| |||||||||| |||| | ||| |||||| || ||||||||| || |||
Sbjct 181 GCGGAGAACGTGG-CGAACAGCCTGCACAAGGGTGACCGGGTGATCGTCGTCGGCAATCT 239
Query 35098 CCGGGCGCGCAGCTACGACGACCGCGA-CGGAAACCGTCGCACTGTGATCGGGATCGAAG 35156
||| ||| |||||| | | || ||| || ||||| ||| || |||||| |
Sbjct 240 CCGCCAGCGGTCCTACGA-GTCGAAGACCGGCGACACGCGCACCGTGTACGAGATCGAGG 298
Query 35157 TCGATGACGTGGGCCC 35172
|| || || |||||
Sbjct 299 CGGACGAGGTCGGCCC 314
>SEQ22413
Length=7522
Score = 105 bits (116), Expect = 2e-18
Identities = 163/229 (71%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 34862 ACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATACCAATTCG 34921
||||| ||||||||||| ||||||||| || |||||||| |||| || ||| |
Sbjct 3687 ACCCCCATCACCATCGTCGGCAACCTCGTGGCGGACCCCGAGTTGCGCTACACCC---CC 3631
Query 34922 GGCATTGCCG---TCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGCAA 34978
|| ||||| || |||||||| || || |||||||| || |||||| ||
Sbjct 3630 AGCGGTGCCGCGGTCACCAACTTCCGGGTGGCTTCCACACCGCGACGCTTCGACTCACAG 3571
Query 34979 GCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGT-CAGCC 35037
||||| | ||| |||| ||||||| |||||||| ||||| | ||||| | |||
Sbjct 3570 ACCAACCAGTGGGTCGACGACGAGGCCTTGTTCCTGACCTGCAACATCTGGCGCACCGCC 3511
Query 35038 GGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTC 35086
| |||||||||| ||| | ||| ||||||| || |||||||||
Sbjct 3510 G-CCGAGAACGTCGCCAACAGCCTGCACAAGGGCGACCGGGTGATCGTC 3463
>SEQ32968
Length=2597
Score = 89.7 bits (98), Expect = 1e-13
Identities = 211/317 (67%), Gaps = 4/317 (1%)
Strand=Plus/Minus
Query 34859 GAAACCCCTATCACCATCGTGGGCAACCTCACCGCCGACCCCGAACTGCGATATAC--CA 34916
|| |||| ||||| |||| ||||||||| || ||| || || | || || |
Sbjct 2188 GATACCCAGATCACTGTCGTCGGCAACCTCGTTGCTGACGTTGACCTTAGGTACACGCCC 2129
Query 34917 ATTCGGGCATTGCCGTCGCCAACTTCACCGTCGCATCCACACCACGCACATTCGACCGGC 34976
| | | || || ||||| |||||| |||||| || || || || |||||| |
Sbjct 2128 AGTGGCGCG--GCGGTCGCGAACTTCCGCGTCGCGTCAACGCCCCGTCGGTTCGACTCGA 2071
Query 34977 AAGCCAACGAATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGC 35036
| | ||| | ||| ||||| ||||| |||||||| |||| || ||||| |||
Sbjct 2070 AGTCGAACCAGTGGGTCGACGGGGAGGCACTGTTCCTCAGCTGCAACGTCTGGCGCCAGG 2011
Query 35037 CGGCCGAGAACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTC 35096
| ||||||||||| || | || ||| |||||| || ||||||||| || || |
Sbjct 2010 CCGCCGAGAACGTCGCGAACTCCCTGCACAAGGGGGACCGCGTGATCGTCTCCGGCCGGC 1951
Query 35097 TCCGGGCGCGCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGAAG 35156
| || ||| |||||| ||| || || | ||||| ||| ||| | | || |
Sbjct 1950 TGCGCCAGCGGTCCTACGAAACCCGTGAGGGTGAGAAGCGCACCGTGTTCGAGGTGGAGG 1891
Query 35157 TCGATGACGTGGGCCCG 35173
|||| || || ||||||
Sbjct 1890 TCGACGAGGTCGGCCCG 1874
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 121638966564330
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |