Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20navojoa_20[refseq_20GCF_5F001654015.1_202016-05-09] 8,053 sequences; 115,885,644 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2 89.7 2e-12 >seq2 Length=4222574 Score = 89.7 bits (98), Expect = 2e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774 |||||||||| |||| ||||| ||||||||||||||||| | || ||||| || Sbjct 534994 AGATGCGTTCGCATATGAACTGGGCAATGCGATCGCCATGCTTCACCTCGAAGTCAGTGT 535053 Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834 | ||||| |||||||| || || || | || || | |||| ||| || || |||| Sbjct 535054 CCGAGTGATTGAAGAGGACAACACCTAAATTTCCGCGATAATCCTCGTCCACAACGCCGG 535113 Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCCGTAG 21893 |||| || |||| ||||| | |||||| || || | || || | ||| || ||| Sbjct 535114 CGCCCACATCGATAAAATTCTTTACGGCCAGCCCGGAGCGCGGTGCTATGCGACCATAG 535172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084518852187294