Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq300 114 1e-23 seq73 114 1e-23 seq22 114 1e-23 seq15 114 1e-23 seq8 114 1e-23 >seq300 Length=136790 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 88740 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 88681 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 88680 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 88621 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 88620 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 88565 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 88564 ATCTCAGTA 88556 >seq73 Length=471550 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 240767 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 240826 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 240827 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 240886 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 240887 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 240942 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 240943 ATCTCAGTA 240951 >seq22 Length=1073832 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 474932 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 474873 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 474872 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 474813 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 474812 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 474757 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 474756 ATCTCAGTA 474748 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Plus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 1049836 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 1049895 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 1049896 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 1049955 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 1049956 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 1050011 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 1050012 ATCTCAGTA 1050020 >seq15 Length=1383265 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 155556 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 155497 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 155496 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 155437 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 155436 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 155381 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 155380 ATCTCAGTA 155372 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 331973 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 331914 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 331913 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 331854 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 331853 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 331798 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 331797 ATCTCAGTA 331789 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 1025135 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 1025076 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 1025075 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 1025016 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 1025015 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 1024960 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 1024959 ATCTCAGTA 1024951 >seq8 Length=1553183 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 330572 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 330513 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 330512 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 330453 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 330452 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 330397 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 330396 ATCTCAGTA 330388 Score = 114 bits (126), Expect = 1e-23 Identities = 141/189 (75%), Gaps = 13/189 (7%) Strand=Plus/Minus Query 1 GGCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAG 60 |||| |||||||||||| || | |||||||||||||||||| | ||||||||||| Sbjct 902377 GGCATTCGGTGGATGCCTTGGTACCAGGAGGCGAAGAAGGACGTAGCACGCTGCGAAAAG 902318 Query 61 CTACGGGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCA----ACCCGA 116 ||||||||| || | | ||||||||||||||||||||||||||| ||||| Sbjct 902317 CTACGGGGAGCCGCGAGCAGGCTTTGATCCGTAGATATCCGAATGGGGCAACCCACCCGC 902258 Query 117 TA---TATTGGAG-ATATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | ||| || | || |||| ||| || |||||||| ||||||||||||| Sbjct 902257 AAGGGTATCACAGTCTGAATACATAGGGCT----GTGAGGCGAACCCGGGGAACTGAAAC 902202 Query 172 ATCTAAGTA 180 |||| |||| Sbjct 902201 ATCTCAGTA 902193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476791062235