Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1207 109 6e-22 seq300 82.4 8e-14 seq73 82.4 8e-14 seq22 82.4 8e-14 seq15 82.4 8e-14 seq8 82.4 8e-14 >seq1207 Length=4506 Score = 109 bits (120), Expect = 6e-22 Identities = 137/185 (74%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| |||| || | || || ||||||||| | ||| || || || Sbjct 3987 CGCAAACCGACACAGGTAGGCGAGAAGAGAATTCTAAGGCGCGCGGAAGAACTCTCG-TT 4045 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC----TACCCAGAAA 136 |||||||| |||||| |||||| |||||||||||| || |||| || || ||| Sbjct 4046 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCCCCGGTAGTGTGAAT 4105 Query 137 TG-----GGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGT 191 | || || ||||| ||| ||| ||| || |||||||| |||||||||||| |||| Sbjct 4106 AGCACGAGGGGGCCGCAGTGAAAAGGCCCAAGCGACTGTTTAGCAAAAACACAGGTCTGT 4165 Query 192 GCCAA 196 || || Sbjct 4166 GCGAA 4170 >seq300 Length=136790 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 87267 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 87208 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 87207 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 87148 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 87147 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 87089 >seq73 Length=471550 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 242240 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 242299 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 242300 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 242359 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 242360 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 242418 >seq22 Length=1073832 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 473459 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 473400 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 473399 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 473340 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 473339 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 473281 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 1051309 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 1051368 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 1051369 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 1051428 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 1051429 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 1051487 >seq15 Length=1383265 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 154083 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 154024 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 154023 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 153964 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 153963 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 153905 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 330500 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 330441 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 330440 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 330381 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 330380 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 330322 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 1023662 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 1023603 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 1023602 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 1023543 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 1023542 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 1023484 >seq8 Length=1553183 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 329099 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 329040 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 329039 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 328980 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 328979 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 328921 Score = 82.4 bits (90), Expect = 8e-14 Identities = 127/179 (71%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || |||| |||||||||||| ||| | | | |||| Sbjct 900904 AAACCGACACAGGTGGACTGGTAGAGAATACCAAGGCGCTTGAGAGAACGATGCTGAAGG 900845 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCC-----TACCCAGAAATG 138 ||||||||||| | | |||||||||||||||| | | ||| | || || Sbjct 900844 AACTAGGCAAATTACTCGTGTAACTTCGGGATAAGCGAGACCCGTTGGTGGGCAACCATT 900785 Query 139 GGAGGG-CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| ||| ||| ||| || |||||||| |||||||||||||| ||| || Sbjct 900784 GGCGGGTGGCACAGACCAGGGGGTAGCGACTGTTTAGTAAAAACACAGGGCTCTGCGAA 900726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531190042490