Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20obscura_20[genbank_20GCA_5F002217835.1_202017-07-01] 1,935 sequences; 181,868,570 total letters Query= AAMG01001545.1 Length=359 Score E Sequences producing significant alignments: (Bits) Value seq26 116 8e-24 seq22 116 8e-24 >seq26 Length=998041 Score = 116 bits (128), Expect = 8e-24 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20 CAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATACATGTAGCACACGTAACC 79 ||| || ||||| || ||||| || ||||| ||||||| ||||||||||| | || | Sbjct 201116 CAGGGCTGGCAGAATATTCACATTGGGCGATGCCTTGGCGTACATGTAGCAGGCATAGTC 201175 Query 80 GCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCATAGGGGTTGGTGTACGG 139 |||| | |||||||| |||||||| ||||||||||| ||||| |||||||| || || Sbjct 201176 CGAGCAATAGCCGCAGAAATTGCACGGCCCCATCTGCGCCCCATACGGGTTGGTATAGGG 201235 Query 140 CCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACCGACCTCGGCAGCGGCTTT 199 || | |||||||| |||| | ||| || | | ||| |||| | || ||||| Sbjct 201236 GTGGGACGCATTGGCCGCGGGCATGGCGTACGGGTGAAACCCGGCCTCTGTCGCCGCTTT 201295 Query 200 CTGAAACAGCTGTGCGG 216 | || || || |||| Sbjct 201296 GCGGAAAAGGTGCGCGG 201312 >seq22 Length=1073832 Score = 116 bits (128), Expect = 8e-24 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 20 CAGCGCCGGCAGGATGTTCACGTTCGGCGAAGCCTTGGAATACATGTAGCACACGTAACC 79 ||| || ||||| || ||||| || ||||| ||||| | |||||||||||| | || | Sbjct 204523 CAGGGCTGGCAGAATATTCACATTGGGCGATGCCTTTGCATACATGTAGCAGGCATAGTC 204464 Query 80 GCTGCAAAAACCGCAGAAGTTGCACGGGCCCATCTGCGCGCCATAGGGGTTGGTGTACGG 139 |||| | |||||||| ||||| || ||||||||||| |||||||||||||| || || Sbjct 204463 CGAGCAATAGCCGCAGAAATTGCATGGCCCCATCTGCGCCCCATAGGGGTTGGTATAGGG 204404 Query 140 CCCCGAGGTATTGGCCGACGGCAGGTTGTAGGGTTTGTAACCGACCTCGGCAGCGGCTTT 199 || | |||||||| |||| | ||| || | | ||| |||| | || ||||| Sbjct 204403 GTGGGACGCATTGGCCGCGGGCATGGCGTACGGGTGAAACCCGGCCTCTGTCGCCGCTTT 204344 Query 200 CTGAAACAGCTGTGCGG 216 | || || || |||| Sbjct 204343 GCGGAAAAGGTGCGCGG 204327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046379752160